Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_22190 |
Symbol | |
ID | 8387543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 2387823 |
End bp | 2388626 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644976272 |
Product | hypothetical protein |
Protein accession | YP_003134054 |
Protein GI | 257056222 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.138955 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGAAACA ACAGGTTGCC GAACGACAAC GCCGGCTTCT CGAACAAGCA CAGGCGACTG GACGTACGGC TGCCCGAGCA CGTGGAAGAC ATCGACCAGG ACAGCGAATA TTGCTCAGTG CTGCTCGACG GTTCCTGGCA GCAAGTCCGG TTCCACGACT ACGACCGCAT CTTCACCATC CCCGGTCTCT ACGAACAGCT GTTCCACGAC ATTCTCGATT GCCGTTCCCC CGACGTCATC GGCAAGCTGC TGAAGGAAGA GTTGCAGCGC AACAACGTGC CCGCCTCGTC GCTGCGAGTC CTCGATCTCG GCGCCGGTAA CGGAGTGGTC GGCGAGCAAC TTCGCACGGT GGGCGTGGGC TATCTGGTCG GCGCGGACAT CCTGCAGGAG GCCAAGGACG CCGCGCGACG GGACCGGCCC GAGGTGTATG ACGACTACCA CGTCGTCGAC ATGACCCAGC TCACGGAGTC AGAGCAGGAC GCCCTCGCCG GTCACAGGTT CAACGCGTTG TCGTGTGTGG CGGCCCTCGG TTACGGCGAC ATCCCGCCCG AAGCGTTCCG CGCCGCCTTC AACTTCGTCT CCGACGGAGG GTGGATCGCG TTCACCATCA AGGACCGGTT CCTGTCCGAC TCCGACACCT CGGGTTTCGC CCGGCTGATC GAACGCTGCA CCGAGGCGGG CGTCCTCCAA GTCCGCGTGT CGGAACGGTA CAGGCACCGG CTCAACGTAC GTGGCGAGCC GCTCCACTAC GTGGCCCTCG TCGGGACCAA ACAGTCGGAC ATCCCCGCCG ATCTCCTGCC CTGA
|
Protein sequence | MGNNRLPNDN AGFSNKHRRL DVRLPEHVED IDQDSEYCSV LLDGSWQQVR FHDYDRIFTI PGLYEQLFHD ILDCRSPDVI GKLLKEELQR NNVPASSLRV LDLGAGNGVV GEQLRTVGVG YLVGADILQE AKDAARRDRP EVYDDYHVVD MTQLTESEQD ALAGHRFNAL SCVAALGYGD IPPEAFRAAF NFVSDGGWIA FTIKDRFLSD SDTSGFARLI ERCTEAGVLQ VRVSERYRHR LNVRGEPLHY VALVGTKQSD IPADLLP
|
| |