Gene Svir_22190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_22190 
Symbol 
ID8387543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2387823 
End bp2388626 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content64% 
IMG OID644976272 
Producthypothetical protein 
Protein accessionYP_003134054 
Protein GI257056222 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.138955 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAACA ACAGGTTGCC GAACGACAAC GCCGGCTTCT CGAACAAGCA CAGGCGACTG 
GACGTACGGC TGCCCGAGCA CGTGGAAGAC ATCGACCAGG ACAGCGAATA TTGCTCAGTG
CTGCTCGACG GTTCCTGGCA GCAAGTCCGG TTCCACGACT ACGACCGCAT CTTCACCATC
CCCGGTCTCT ACGAACAGCT GTTCCACGAC ATTCTCGATT GCCGTTCCCC CGACGTCATC
GGCAAGCTGC TGAAGGAAGA GTTGCAGCGC AACAACGTGC CCGCCTCGTC GCTGCGAGTC
CTCGATCTCG GCGCCGGTAA CGGAGTGGTC GGCGAGCAAC TTCGCACGGT GGGCGTGGGC
TATCTGGTCG GCGCGGACAT CCTGCAGGAG GCCAAGGACG CCGCGCGACG GGACCGGCCC
GAGGTGTATG ACGACTACCA CGTCGTCGAC ATGACCCAGC TCACGGAGTC AGAGCAGGAC
GCCCTCGCCG GTCACAGGTT CAACGCGTTG TCGTGTGTGG CGGCCCTCGG TTACGGCGAC
ATCCCGCCCG AAGCGTTCCG CGCCGCCTTC AACTTCGTCT CCGACGGAGG GTGGATCGCG
TTCACCATCA AGGACCGGTT CCTGTCCGAC TCCGACACCT CGGGTTTCGC CCGGCTGATC
GAACGCTGCA CCGAGGCGGG CGTCCTCCAA GTCCGCGTGT CGGAACGGTA CAGGCACCGG
CTCAACGTAC GTGGCGAGCC GCTCCACTAC GTGGCCCTCG TCGGGACCAA ACAGTCGGAC
ATCCCCGCCG ATCTCCTGCC CTGA
 
Protein sequence
MGNNRLPNDN AGFSNKHRRL DVRLPEHVED IDQDSEYCSV LLDGSWQQVR FHDYDRIFTI 
PGLYEQLFHD ILDCRSPDVI GKLLKEELQR NNVPASSLRV LDLGAGNGVV GEQLRTVGVG
YLVGADILQE AKDAARRDRP EVYDDYHVVD MTQLTESEQD ALAGHRFNAL SCVAALGYGD
IPPEAFRAAF NFVSDGGWIA FTIKDRFLSD SDTSGFARLI ERCTEAGVLQ VRVSERYRHR
LNVRGEPLHY VALVGTKQSD IPADLLP