Gene Jann_2499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2499 
Symbol 
ID3934958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2497957 
End bp2498568 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content65% 
IMG OID637904859 
Productmethyltransferase type 12 
Protein accessionYP_510441 
Protein GI89054990 
COG category[R] General function prediction only 
COG ID[COG4976] Predicted methyltransferase (contains TPR repeat) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.301518 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGCC CCATCGACGC AAAACTCTGG ACGCCCCGCT CTGTCGAAGA CACGCAAGCC 
CTCTATGCCG ACTGGGCGCA GGCCTATGAC GCCGACATGG CCCGGATGTC CTACGCCACC
CCCACCCGGA TCGCCGAGGC TTTGGCGTCG GTCTGGCCCA AGCGGGACGC GCCGGTGCTG
GATTTCGGCT GTGGTACGGG CCTGAGCGGG GCCGCTTTGC GGGCGGCGGG CTTCGCGCGG
ATCGACGGCA CGGATATCTC GCCAGAGATG CTGGACGTCG CCCGCTACAA GGCGCTCTAC
GACACGCTGC ACCTCGGCAT CCCGGGGGAC GTGCCCGGCG CGCCCGGTGA CTACAGCGCC
ATCGTTGCCA CAGGGGTCGT CAGCCTCGGC GCAGCGCCGC CTTCGATGCT GCGCGTTCTG
TTGGATGCGC TGATACCGGG CGGGCGGCTG GCGTTCAGCT TCAATGATCC AACCCTCAAC
GATCCCACCT ATACCTATGC TTTGGCCAAT GTTCTGGCTG ACAATATTGC CCGTGTGGAA
TACCGCGCCC ACGGGCCACA TCTGTCTGAA AAAGTCACAG GCTCCGACGT GATCGTACTT
CTGCGGCAAT GA
 
Protein sequence
MKSPIDAKLW TPRSVEDTQA LYADWAQAYD ADMARMSYAT PTRIAEALAS VWPKRDAPVL 
DFGCGTGLSG AALRAAGFAR IDGTDISPEM LDVARYKALY DTLHLGIPGD VPGAPGDYSA
IVATGVVSLG AAPPSMLRVL LDALIPGGRL AFSFNDPTLN DPTYTYALAN VLADNIARVE
YRAHGPHLSE KVTGSDVIVL LRQ