| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1622 |
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| Symbol | |
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| ID | 7974851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1753569 |
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| End bp | 1754297 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644792222 |
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| Product | 3-demethylubiquinone-9 3-methyltransferase |
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| Protein accession | YP_002943539 |
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| Protein GI | 239814629 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
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| TIGRFAM ID | [TIGR01983] ubiquinone biosynthesis O-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGATC ATGTGAATGC CGACCCGGCG GAACTCGCCA AGTTTTCGGA GCTTGCCCAC
CGCTGGTGGG ATTTGGACAG CGAATTCCGC CCGCTCCATG AAATCAATCC ATTGCGACTG
GAATGGATTG ACGGTATTGC GCCGATTTCG CAGCGCAGGG TGCTCGATAT CGGTTGCGGC
GGCGGCATCC TGGCCGATTC GATGGCCCGA AAGGGCGCGG ACGTGCTCGG CATCGACCTG
GCGAGCAAGG CGCTCAAGGT GGCGCGCCTG CATGCGCTCG AAGCCGGCAC CCAGGGCGTC
AAGTACCGGG AAGTCAGCGC CGAGGCGCTG GCTGCGGAGC AGCCCGGCAG TTTCGATGTC
GTCACCTGCA TGGAAATGCT GGAGCACGTG CCCGAGCCCG CTTCGATCGT CCAGGCCTGT
GCCACGCTCG TCAAGCCGGG CGGCTGGGTG TTCTTTTCCA CCATCAACCG CAACCTGAAG
TCGTTCATGC TTGCGATCGT CGGCGCCGAA TACGTCCTGG GCATGCTGCC CCGGGGCACG
CACGAATACG CGAAGCTGCT GCGCCCCAGC GAACTGGCGG CCCACTGCCG CGCGGCAGGC
CTCGACCTGC GGCATACGCG CGGCATGGAA CACAACCCGC TGACGCGGCG TTACTGGCTC
AGCGCCGACA CCAGTGTCAA CTACATGTTC GCCACGCAGA AGCCGGCATT GCCGGGCTCG
CAGACGTGA
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| Protein sequence | MTDHVNADPA ELAKFSELAH RWWDLDSEFR PLHEINPLRL EWIDGIAPIS QRRVLDIGCG
GGILADSMAR KGADVLGIDL ASKALKVARL HALEAGTQGV KYREVSAEAL AAEQPGSFDV
VTCMEMLEHV PEPASIVQAC ATLVKPGGWV FFSTINRNLK SFMLAIVGAE YVLGMLPRGT
HEYAKLLRPS ELAAHCRAAG LDLRHTRGME HNPLTRRYWL SADTSVNYMF ATQKPALPGS
QT
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