15 homologs were found in PanDaTox collection
for query gene Strop_0377 on replicon NC_009380
Organism: Salinispora tropica CNB-440



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009380  Strop_0377  XRE family transcriptional regulator  100 
 
 		 138 aa  277  4e-74  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009953  Sare_0448  XRE family transcriptional regulator  80.88 
 
 		 137 aa  216  6e-56  Salinispora arenicola CNS-205  Bacteria  normal  0.242028  decreased coverage  0.00000314035 
 
 
-
 
NC_009380  Strop_0866  helix-turn-helix domain-containing protein  44.78 
 
 		 147 aa  112  1.0000000000000001e-24  Salinispora tropica CNB-440  Bacteria  normal  0.438105  normal  1 
 
 
-
 
NC_009953  Sare_0812  XRE family transcriptional regulator  48.41 
 
 		 156 aa  111  4.0000000000000004e-24  Salinispora arenicola CNS-205  Bacteria  normal  1  hitchhiker  0.00335965 
 
 
-
 
NC_009380  Strop_4015  helix-turn-helix domain-containing protein  38.1 
 
 		 189 aa  89.4  1e-17  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009953  Sare_3742  helix-turn-helix domain-containing protein  40.37 
 
 		 111 aa  65.5  0.0000000003  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009953  Sare_3793  helix-turn-helix domain-containing protein  40.37 
 
 		 111 aa  65.5  0.0000000003  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.0729404 
 
 
-
 
NC_007520  Tcr_1338  XRE family transcriptional regulator  30.26 
 
 		 198 aa  43.5  0.0009  Thiomicrospira crunogena XCL-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_011206  Lferr_1806  transcriptional regulator, XRE family  30.63 
 
 		 181 aa  41.6  0.003  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011761  AFE_2148  DNA-binding protein, putative  30.63 
 
 		 181 aa  41.6  0.003  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_011658  BCAH187_A3349  DNA-binding protein  26.04 
 
 		 374 aa  40.8  0.005  Bacillus cereus AH187  Bacteria  normal  0.166445  n/a   
 
 
-
 
NC_006274  BCZK3019  DNA-binding protein; transcriptional regulator  26.04 
 
 		 374 aa  40.8  0.006  Bacillus cereus E33L  Bacteria  normal  0.28018  n/a   
 
 
-
 
NC_011773  BCAH820_3347  DNA-binding protein  26.04 
 
 		 374 aa  40.8  0.006  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_005945  BAS3127  DNA-binding protein  26.04 
 
 		 374 aa  40.4  0.008  Bacillus anthracis str. Sterne  Bacteria  normal  0.81107  n/a   
 
 
-
 
NC_007530  GBAA_3373  DNA-binding protein  26.04 
 
 		 374 aa  40.4  0.008  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.645168  n/a   
 
 
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