Gene Lferr_1806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1806 
Symbol 
ID6877790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1784677 
End bp1785222 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content60% 
IMG OID642789675 
Producttranscriptional regulator, XRE family 
Protein accessionYP_002220234 
Protein GI198283913 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGG TCTGCAAAAA AATTCGGCAA CTTCGCGAGG ATAGGGGATG GTCCGTGCGC 
GGACTGGCGG CGCGTGCCGA AATTTCACCC AGTGCCCTCT CGCAGATCGA GGCGGGGCAG
AACTCCCCCT CCATCGCCAC TCTGGAAAAA ATCTGCGCGG CGCTGCAGAT TCCCATCGCC
GCGATTTTCG ATGACGGTGA AACGGCGGGT TTGCCATGGA TCATGCGCAG CGGTGACCGA
CGCAAGTTTT ACAGTGCCGG TTCCCACGCT TCACTGGAAC CGCTGGCTCG CGGCCTGCCG
CAAAAGAAAA TGCAACCGCT GCTGATGGTA CTTGAACCGG GCGGAGAGTG TGGTGAACAC
CCCTATACCA GTGCCGAAGG AGAAGAATTC ACCATCGTCA TCCGCGGGAC GGCCGCTTTT
GAGCAATCCG GGGTGACCAC GGAACTGGGG GAGGGCGACG CCATTTACTA TGATCCGCGT
CTGCCCCACA ACTGGCACAA CCGCGGCCAC TCCGCAACGA CCCTGTTGGT GGTGGTAGCC
CAGTGA
 
Protein sequence
MEQVCKKIRQ LREDRGWSVR GLAARAEISP SALSQIEAGQ NSPSIATLEK ICAALQIPIA 
AIFDDGETAG LPWIMRSGDR RKFYSAGSHA SLEPLARGLP QKKMQPLLMV LEPGGECGEH
PYTSAEGEEF TIVIRGTAAF EQSGVTTELG EGDAIYYDPR LPHNWHNRGH SATTLLVVVA
Q