Gene Strop_0866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0866 
Symbol 
ID5057309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp969522 
End bp969965 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content69% 
IMG OID640473135 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_001157721 
Protein GI145593424 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.438105 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAGA CGGCCAACGC ACGGAAGATC GCCTTCGCCA CCTTCGTCCG TCGCGCGCTC 
GACGAGGCCC GGGCCACCCG AGCCTGGAGC GGCACTGAGG TCTCCCGACG CACCGGCGTC
TCCCGGCAGA CAATCAATCG ATGGGTCCGG GGCGACTGGG CCAGCGACCC GGAGGCGGAA
CGCGTCGTGG CCTTCTGCGA AGGCCTCGGG CTCGACCGGG CCACCGCCTT CACCGCCCTG
GGCTGGGACC GGCAGAACGC CGCGCATCGA GCCGGGGCGA CCCCGCCCCC GATGGATCCC
GATGTCCAGG CGCTCCTGCG CCGACTGGTA GACCCCGAGG TATCGGACGC GGAGAAGTTC
CACATTCGAG AAACTATCCG TTACCTCGCG TATCGCCCAA CCCTCCCGAT AGCAGCCTCA
AACCGGGGCA AACGGGTTGG ATGA
 
Protein sequence
MTETANARKI AFATFVRRAL DEARATRAWS GTEVSRRTGV SRQTINRWVR GDWASDPEAE 
RVVAFCEGLG LDRATAFTAL GWDRQNAAHR AGATPPPMDP DVQALLRRLV DPEVSDAEKF
HIRETIRYLA YRPTLPIAAS NRGKRVG