Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0866 |
Symbol | |
ID | 5057309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 969522 |
End bp | 969965 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640473135 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001157721 |
Protein GI | 145593424 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.438105 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGAGA CGGCCAACGC ACGGAAGATC GCCTTCGCCA CCTTCGTCCG TCGCGCGCTC GACGAGGCCC GGGCCACCCG AGCCTGGAGC GGCACTGAGG TCTCCCGACG CACCGGCGTC TCCCGGCAGA CAATCAATCG ATGGGTCCGG GGCGACTGGG CCAGCGACCC GGAGGCGGAA CGCGTCGTGG CCTTCTGCGA AGGCCTCGGG CTCGACCGGG CCACCGCCTT CACCGCCCTG GGCTGGGACC GGCAGAACGC CGCGCATCGA GCCGGGGCGA CCCCGCCCCC GATGGATCCC GATGTCCAGG CGCTCCTGCG CCGACTGGTA GACCCCGAGG TATCGGACGC GGAGAAGTTC CACATTCGAG AAACTATCCG TTACCTCGCG TATCGCCCAA CCCTCCCGAT AGCAGCCTCA AACCGGGGCA AACGGGTTGG ATGA
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Protein sequence | MTETANARKI AFATFVRRAL DEARATRAWS GTEVSRRTGV SRQTINRWVR GDWASDPEAE RVVAFCEGLG LDRATAFTAL GWDRQNAAHR AGATPPPMDP DVQALLRRLV DPEVSDAEKF HIRETIRYLA YRPTLPIAAS NRGKRVG
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