11 homologs were found in PanDaTox collection
for query gene Ssol_2269 on replicon CP001800
Organism: Sulfolobus solfataricus 98/2



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
CP001800  Ssol_2269  CRISPR-associated protein, Csa1 family  100 
 
 
291 aa  602  1.0000000000000001e-171  Sulfolobus solfataricus 98/2  Archaea  normal  0.398653  n/a   
 
 
-
 
NC_009073  Pcal_1274  CRISPR-associated RAMP Csa1 family protein  32.28 
 
 
282 aa  146  3e-34  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal  0.0187376 
 
 
-
 
NC_009376  Pars_1124  CRISPR-associated RAMP Csa1 family protein  30.56 
 
 
282 aa  139  6e-32  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  0.0540099  normal  0.783606 
 
 
-
 
CP001800  Ssol_2295  CRISPR-associated protein, Csa1 family  35.27 
 
 
282 aa  135  9.999999999999999e-31  Sulfolobus solfataricus 98/2  Archaea  normal  n/a   
 
 
-
 
NC_013385  Adeg_1764  CRISPR-associated protein, Csa1 family  32.79 
 
 
307 aa  127  1.0000000000000001e-28  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1286  CRISPR-associated RAMP Csa1 family protein  32.86 
 
 
311 aa  127  2.0000000000000002e-28  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.322463  n/a   
 
 
-
 
NC_010525  Tneu_1139  CRISPR-associated RAMP Csa1 family protein  29.12 
 
 
278 aa  127  3e-28  Thermoproteus neutrophilus V24Sta  Archaea  normal  0.579002  hitchhiker  0.00000309531 
 
 
-
 
NC_010525  Tneu_0579  CRISPR-associated RAMP Csa1 family protein  31.12 
 
 
287 aa  112  7.000000000000001e-24  Thermoproteus neutrophilus V24Sta  Archaea  decreased coverage  0.000306533  normal  0.121331 
 
 
-
 
NC_009376  Pars_1147  CRISPR-associated RAMP Csa1 family protein  30.69 
 
 
272 aa  110  3e-23  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  normal  0.0285965 
 
 
-
 
NC_009440  Msed_1146  CRISPR-associated RAMP Csa1 family protein  31.37 
 
 
272 aa  107  2e-22  Metallosphaera sedula DSM 5348  Archaea  normal  0.480341  normal 
 
 
-
 
NC_009073  Pcal_0265  CRISPR-associated RAMP Csa1 family protein  32.12 
 
 
197 aa  75.5  0.0000000000009  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>