| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1274 |
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| Symbol | |
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| ID | 4908662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1182606 |
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| End bp | 1183454 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640125027 |
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| Product | CRISPR-associated RAMP Csa1 family protein |
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| Protein accession | YP_001056164 |
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| Protein GI | 126459886 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4343] Uncharacterized protein conserved in archaea |
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| TIGRFAM ID | [TIGR01896] CRISPR-associated protein, Csa1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0187376 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTAACCC TCCTAGAGAT AGCCAGACTC CTCAAAAGGG CCAAGGTAGT AGCGGGAGGA
GCCGAGGTCT CGCCAGACCT CAGAGGGTGG AGCTACGACA AGCCACCCGT CAAGCCCCCC
GCATACCTCT CCCTGGCGCT GTCCGACTTC GCCTACGGCT ACTGCCCCAC GGGGAGGAGC
CTATACCTAA AATACGTCGC GGGGGAGCGC GGCGCCACCA ACAAGGCCCT CCTCGAGGGG
CAAGTACTGC ACTCCGTCCT CTTCCGCGCC GTCGAGGACT ACAAGCGATA TGTGTACTCA
GGCCAGCCCA TGTCGCCGCC CCTAGAGGGA GTCCCAGAGG AGCTGAAGCC CAAGGCCGAG
GCCCTCTACA AGTACATAGC CGCCAGGCTA CTCGGCGAGC ACCACTACGT CTACGCCTCC
CGCACCGCGA GGGGGAGAGA CTCCGCCGCC TTCTACGTCG CCCCACTCGC CACCCAGGTG
GCAGTAGACG GCACACCCCT CGGCCTATCC ACGGTAGTGG CAGACGCCGT GGCCCTAGGC
GCGGTTGTGG AGTTCAAATT CGGCCCAGCC CCCAACGTTG AGGCCGCCCT GGCGGGATAC
GCCATGGCCA TAGAGGCGGA GTGGGGAGTC CCAATAGACT ACGGCATCCA CGTCCAAATC
TCGGTAAACG CCACCGTGGA GTACAGAGCC ACGGCCCACT TCCTCGGAGA CGACGCCCGC
TCCAAGTTCC TAGAGCTCAG AGACGAGGCC ATAGACGTCG TGGCCTCGGG AAGAGACCCC
GGCCCAGCCC CCCAGTGCAA CAAGGCCTGC CCCTTCTACC ACATCTGCCA TGCAGATCGC
AGTAGCTAG
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| Protein sequence | MLTLLEIARL LKRAKVVAGG AEVSPDLRGW SYDKPPVKPP AYLSLALSDF AYGYCPTGRS
LYLKYVAGER GATNKALLEG QVLHSVLFRA VEDYKRYVYS GQPMSPPLEG VPEELKPKAE
ALYKYIAARL LGEHHYVYAS RTARGRDSAA FYVAPLATQV AVDGTPLGLS TVVADAVALG
AVVEFKFGPA PNVEAALAGY AMAIEAEWGV PIDYGIHVQI SVNATVEYRA TAHFLGDDAR
SKFLELRDEA IDVVASGRDP GPAPQCNKAC PFYHICHADR SS
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