| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0265 |
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| Symbol | |
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| ID | 4909903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 259693 |
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| End bp | 260286 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640124017 |
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| Product | CRISPR-associated RAMP Csa1 family protein |
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| Protein accession | YP_001055168 |
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| Protein GI | 126458890 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4343] Uncharacterized protein conserved in archaea |
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| TIGRFAM ID | [TIGR01896] CRISPR-associated protein, Csa1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCGGG AGTTGAGGTG GCTCAAGTCG GTGCGGGTGG AGGTGTCTGA GGAGCTTAGG
GGGTGGCGCT GGGACTCGCC TCCTGTGGCT CCGCCTCCTC TGGGGGTTAG AGTGTCGGTG
TCGGAGGTCG GGGGTGGGGT GTGTGAGACT AGGCGGGACG TGTACTTGAG GAGGGTGGGG
GGCGTCGAGG GGCGGCCTTC TCGGGCTGTG AAGTATGGGG CGTATATCCA CGAGGTGTTT
AGGCTGTCTC TTAAGCGGCT TCGTAGGCTT GTTGAAGATG GTGTGGCGTC TGGGTGGGAG
CTTTTGCAGG CGTTTGACGC TGAGGGTGTG GCTAAGGATG CGGCGGCCGC GGCGGAGTTT
GAGCCTGACG TGAGGGGGGT GAAGCTGGCT AGGTGGCTGG CGGTGCAAGT GGCGGCGAGG
GTGGACGAGG TTAGGTCTAG GTCTCACGTG GATGGGGACT CTTTGGCGGC TAGGGCCGTT
CCCCTGTGGA CTGAGTACGT GGTTGACGGG AGGCCTCTGG GCCTTACCTA CGTGAGGTCC
GACGCCTTGG CCTACGACGT GGTGGTGGAG GTGAAGGTGG GGCCCGCGGC GTGA
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| Protein sequence | MFRELRWLKS VRVEVSEELR GWRWDSPPVA PPPLGVRVSV SEVGGGVCET RRDVYLRRVG
GVEGRPSRAV KYGAYIHEVF RLSLKRLRRL VEDGVASGWE LLQAFDAEGV AKDAAAAAEF
EPDVRGVKLA RWLAVQVAAR VDEVRSRSHV DGDSLAARAV PLWTEYVVDG RPLGLTYVRS
DALAYDVVVE VKVGPAA
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