| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1139 |
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| Symbol | |
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| ID | 6165851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | + |
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| Start bp | 1027892 |
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| End bp | 1028728 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641668290 |
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| Product | CRISPR-associated RAMP Csa1 family protein |
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| Protein accession | YP_001794515 |
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| Protein GI | 171185596 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4343] Uncharacterized protein conserved in archaea |
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| TIGRFAM ID | [TIGR01896] CRISPR-associated protein, Csa1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.579002 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00000309531 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTTGACAC TCCTGGAGAT CGCCCGCCTA CTGAGGAGGG CCAAGGTCAC CCAGGGCCCC
GCCGAGGTTT CGCCGGAGCT GAGGGGCTGG GCCTACGACA GGCAGCCGGT CAAGCCCCCC
GCCTACCTCG GCCTCGCCCT CTCCGACTTC GCCTACGGCT ACTGCCCCAC TGGGAGGAGC
CTTTACCTCA AGTACGTGCT GGGGGAGAGG CCCCAGCCCA CCAAGCCCCT CGCCGAGGGG
CAGGCCCTAC ACGCCGTCCT CTTCAAGGCG CTGGAGGACT TCAGGAGGTA CGTCTACTCG
GGCACCCCCA TGTCCCCCCC GGGCGAGGGC ATGCCGGAGG ACCTCAGAGC TAAGGCCGAG
GCGCTGTATA GATACATCGC CGTTAGGCTC ACCGGCGAGT ACCAGCACGT CCTGGCCTCC
CGCCTGGCCA GAAGCCGCGA CGCCGCCGCC TTCTACGCCG CCCCCATAGC CGCCCAGATA
GCCGTAGACG GCGCCCCCCT CGGCCTCAGC TACGTCGTGG CGGACGGCGT GGCGCTGGGG
GCCGTGGTGG AGTTCAAGTT CGGCCCCAGC CAGAACGTCG ACGTAGCGCT GGCCGGCTAC
GCCATGGCCA TAGAGGCGGA GTACGGCGTC CCCATAGACT ACGGCATACA CGTCCAGATA
TCTATAGACG GGCAGGTGGA GTACAGAGCC ACCGCCTACC ACCTCGGCGA CGCCCCCCGC
GCCAAGTTCC TCGAGGCCAG AGACGAGGCC ATCGACGTCG TCGCCTCCGC CAGAGACCCA
GGCCCCGCCC CCCAGTGCCC CAAGACTTGC CCCTACTACA GCGTATGCAG GTCGTAG
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| Protein sequence | MLTLLEIARL LRRAKVTQGP AEVSPELRGW AYDRQPVKPP AYLGLALSDF AYGYCPTGRS
LYLKYVLGER PQPTKPLAEG QALHAVLFKA LEDFRRYVYS GTPMSPPGEG MPEDLRAKAE
ALYRYIAVRL TGEYQHVLAS RLARSRDAAA FYAAPIAAQI AVDGAPLGLS YVVADGVALG
AVVEFKFGPS QNVDVALAGY AMAIEAEYGV PIDYGIHVQI SIDGQVEYRA TAYHLGDAPR
AKFLEARDEA IDVVASARDP GPAPQCPKTC PYYSVCRS
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