5 homologs were found in PanDaTox collection
for query gene Ssed_2463 on replicon NC_009831
Organism: Shewanella sediminis HAW-EB3



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009831  Ssed_2463  XRE family transcriptional regulator  100 
 
 		 71 aa  149  1e-35  Shewanella sediminis HAW-EB3  Bacteria  normal  0.155413  normal  0.111212 
 
 
-
 
NC_008228  Patl_2018  XRE family transcriptional regulator  56.06 
 
 		 83 aa  81.6  0.000000000000003  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.97795  n/a   
 
 
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NC_007912  Sde_1926  XRE family transcriptional regulator  41.27 
 
 		 82 aa  58.5  0.00000003  Saccharophagus degradans 2-40  Bacteria  normal  0.616703  normal  1 
 
 
-
 
NC_007925  RPC_3550  XRE family transcriptional regulator  35.29 
 
 		 92 aa  41.2  0.005  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0545283  normal  1 
 
 
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NC_004578  PSPTO_0717  DNA-binding protein  32.65 
 
 		 80 aa  40  0.01  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
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