Gene RPC_3550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3550 
Symbol 
ID3973750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3949342 
End bp3949620 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content58% 
IMG OID637926661 
ProductXRE family transcriptional regulator 
Protein accessionYP_533408 
Protein GI90425038 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0545283 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAAT CGTTGCGCAC GCCGCGACAG CGGCAGCTCC AATCCCTGCT CACGGCCGCC 
CGCAAGAAGA ACGGAATGAC GCAGGCCGAT TTGGCAACAG CGTTGGACAA ACCGCAATCC
TTTGTCGCCA AGTATGAGAA CGGTGAGCGA CGAATTGACG TAGTCGAGTT TATCGATATT
GCCACTGCGG TGGGAGCTGT TCCCGGGGAA ATTTTGGCGC AAATCCAGTC GGTGGACGAA
TCCGCCAAGC GAACAGGTCG CCGGTCCCGC AAAGCGTAG
 
Protein sequence
MPKSLRTPRQ RQLQSLLTAA RKKNGMTQAD LATALDKPQS FVAKYENGER RIDVVEFIDI 
ATAVGAVPGE ILAQIQSVDE SAKRTGRRSR KA