| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2463 |
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| Symbol | |
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| ID | 5610917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2988003 |
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| End bp | 2988218 |
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| Gene Length | 216 bp |
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| Protein Length | 71 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640933378 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_001474200 |
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| Protein GI | 157375600 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.155413 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.111212 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGAAAATG CTCGCCGTGA GCAAGGCTTG ACTGTGCGAG ACGTCGGCAT ACTTCTTGAT
GAACCTTTTC AGATCGTCAC AAAAATTGAG ACATGCCAGC GGAAGCTTAA CGTCTATGAA
TTTGTGCAGT ACTGTTCGGC CCTCAAGCTC AATCCAAAAG AGGGGATAGA TCTGTTGATG
TATAACTCAG ATTTTGATAC CCGGTTGCAT AAATGA
|
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| Protein sequence | MENARREQGL TVRDVGILLD EPFQIVTKIE TCQRKLNVYE FVQYCSALKL NPKEGIDLLM
YNSDFDTRLH K
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