11 homologs were found in PanDaTox collection
for query gene Sros_3180 on replicon NC_013595
Organism: Streptosporangium roseum DSM 43021



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013595  Sros_3180  hypothetical protein  100 
 
 
221 aa  436  1e-121  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0196071  normal  0.134039 
 
 
-
 
NC_013093  Amir_0554  peptidase C14, caspase catalytic subunit P20  32.84 
 
 
224 aa  84  0.000000000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.210813  n/a   
 
 
-
 
NC_013739  Cwoe_5412  hypothetical protein  32.86 
 
 
177 aa  65.1  0.0000000008  Conexibacter woesei DSM 14684  Bacteria  normal  0.336046  normal 
 
 
-
 
NC_009921  Franean1_5447  hypothetical protein  37.5 
 
 
222 aa  63.2  0.000000003  Frankia sp. EAN1pec  Bacteria  normal  0.519979  normal  0.143037 
 
 
-
 
NC_013159  Svir_03420  hypothetical protein  32.14 
 
 
224 aa  61.2  0.00000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.151092  normal 
 
 
-
 
NC_013124  Afer_0809  hypothetical protein  29.29 
 
 
220 aa  57.8  0.0000001  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.612305  n/a   
 
 
-
 
NC_014210  Ndas_3561  hypothetical protein  30.88 
 
 
215 aa  52.4  0.000005  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.732153 
 
 
-
 
NC_008541  Arth_0626  putative secreted lipoprotein  26.36 
 
 
213 aa  47.8  0.0001  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3513  hypothetical protein  26.92 
 
 
251 aa  46.2  0.0004  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_0753  putative secreted lipoprotein  27.56 
 
 
213 aa  43.9  0.002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00793429 
 
 
-
 
NC_013093  Amir_0503  hypothetical protein  27.27 
 
 
178 aa  44.3  0.002  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
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