Gene Franean1_5447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5447 
Symbol 
ID5673778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6591672 
End bp6592340 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content75% 
IMG OID641244302 
Producthypothetical protein 
Protein accessionYP_001509708 
Protein GI158317200 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.519979 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.143037 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGACGGC CGTCAGGTGT GGTGCACCGC AGGTGGACGA TCGGTCTCGT GCTGGTCGTG 
GCCGTCCTTC CCGCGTCGTG CGGCGATTCG GCCGGCACGA CGGCGGGCTC CCCCGCGATC
TCACCCGGCA CCAGGGTCTC GCCCGGGGCC GCGGTCTCGC CCGGCGGGTC GGTCGGATCA
GGCGAATCCG GCGCGGCTGC CGGAGCCGAT CCGCGGGACG GCGCGGAGCC GTCCGCCGCG
GTCGCGCGAT GCACGGCGGC GGGACTCGCC GCGTCGCTGG ACGCGGCGCC CGCGGAGGGC
ACAGGCCAGC AACAGCTTCA CGTGATCTTC GCCAACCGTT CCGCGGCCGA CTGTGCCCTG
TACGGGCACC CCGGCGCGCA GCTGCGGTCG GCGACCGGAG ACACCTGGGA CCTCGTGCGG
TCCACCCTCG TCAATCCCAC GCGGGTCGTC CTGGCGCCCG GCGAGCGGGC ACACGCGACG
CTGGCCTACC TGCCGACAGA CCCCGGCGAC GGCACCGGCA ACCCTGTCTT CACTCCGGTC
ACCCTCGTCC TGACCCCGCC GGACGAGCGG GACTCGCTGT CGGTCCCGTG GACGCGCGGA
CCCGTCCTGC GGCAGGACGG CGCCACGCAC CCCGGCACGT ACATCTCCGC GCTCGAGCCG
GGCGCCTGA
 
Protein sequence
MRRPSGVVHR RWTIGLVLVV AVLPASCGDS AGTTAGSPAI SPGTRVSPGA AVSPGGSVGS 
GESGAAAGAD PRDGAEPSAA VARCTAAGLA ASLDAAPAEG TGQQQLHVIF ANRSAADCAL
YGHPGAQLRS ATGDTWDLVR STLVNPTRVV LAPGERAHAT LAYLPTDPGD GTGNPVFTPV
TLVLTPPDER DSLSVPWTRG PVLRQDGATH PGTYISALEP GA