Gene Amir_0554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0554 
Symbol 
ID8324713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp597634 
End bp598308 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content80% 
IMG OID644941098 
Productpeptidase C14, caspase catalytic subunit P20 
Protein accessionYP_003098367 
Protein GI256374707 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.210813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCGAC GGCTGATCGC GGTGTGCGGG GTGGCGCTGG CCGGGGTGCT CGCCGCGTGC 
GGCGGCGGCG CCCGCCCCGC AGCCGAGCAG GGCGAGCTCA CGGGCGCGCT CACGACGGAG 
GCCGCGCCGA GCAGCGCGGC GACCGGGTCG AGCGGGCCGG GCGCCTCGGT GGAGGGCGCC 
CCGAACAGCG CGGACCCCGG TGGCGGCGCG GACCCGGTGC CGCCCAGCGA GCCGGGCGGG 
CAGCCGCCGG GCGCGGGGGG CCGCTGCACG GCGGCGTCCC TGACCGGCCG GTTCCAGCCG 
ACCGACGCGG GGGCGGGCAA CCGGCACGGG ATGTTCGTGG TGACCAACAC CGGCGACCGG 
ACGTGCACGC TCACCGGCTA CAGCGGCCTG CAGCTGCTCG ACGCCGCGGG CGGCCCGGTC 
CCGACGGACC TGGTCCGCAC CGGCCGGCCC GCGCCCGAGC CGGTCGTCGT GGAACCGGGC 
GCGTCGGCGT CGGCGGACCT GAGGTGGACC GTGGTGCCGA CCGGCGACGA GCCGGTGGAG 
GGCCCCTGCG AGCCGCAGCC GGCGAGCGCG GCGGCGATCC CCCCGGACGA GACCCAGCCG 
CTCACGGTGA CCTGGCCGGG AGGCCCGGTG TGCGGCGGCG GGAAGATCGA GATCAGCCCG 
TTCCGCGCGG CCTGA
 
Protein sequence
MRRRLIAVCG VALAGVLAAC GGGARPAAEQ GELTGALTTE AAPSSAATGS SGPGASVEGA 
PNSADPGGGA DPVPPSEPGG QPPGAGGRCT AASLTGRFQP TDAGAGNRHG MFVVTNTGDR 
TCTLTGYSGL QLLDAAGGPV PTDLVRTGRP APEPVVVEPG ASASADLRWT VVPTGDEPVE 
GPCEPQPASA AAIPPDETQP LTVTWPGGPV CGGGKIEISP FRAA