59 homologs were found in PanDaTox collection
for query gene Smed_4880 on replicon NC_009620
Organism: Sinorhizobium medicae WSM419



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009620  Smed_4880  protein of unknown function DUF900 hydrolase family protein  100 
 
 
444 aa  912    Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.729214 
 
 
-
 
NC_012858  Rleg_6957  protein of unknown function DUF900 hydrolase family protein  74.75 
 
 
425 aa  629  1e-179  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_5104  protein of unknown function DUF900 hydrolase family protein  76.13 
 
 
433 aa  611  9.999999999999999e-175  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_2400  protein of unknown function DUF900 hydrolase family protein  80.42 
 
 
471 aa  600  1e-170  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.506221  hitchhiker  0.0050611 
 
 
-
 
NC_009720  Xaut_4413  protein of unknown function DUF900 hydrolase family protein  57.25 
 
 
423 aa  474  1e-132  Xanthobacter autotrophicus Py2  Bacteria  normal  0.212754  normal 
 
 
-
 
NC_010581  Bind_0885  protein of unknown function DUF900 hydrolase family protein  52.22 
 
 
418 aa  441  9.999999999999999e-123  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.451232  normal  0.150785 
 
 
-
 
NC_004310  BR0328  putative lipoprotein  52.12 
 
 
413 aa  431  1e-120  Brucella suis 1330  Bacteria  normal  0.221283  n/a   
 
 
-
 
NC_009667  Oant_0425  protein of unknown function DUF900 hydrolase family protein  54.22 
 
 
416 aa  427  1e-118  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_0115  protein of unknown function DUF900 hydrolase family protein  52.1 
 
 
425 aa  412  1e-114  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.958101  normal 
 
 
-
 
NC_009620  Smed_3785  protein of unknown function DUF900 hydrolase family protein  53.46 
 
 
422 aa  411  1e-113  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.658591 
 
 
-
 
NC_011369  Rleg2_0105  protein of unknown function DUF900 hydrolase family protein  53.52 
 
 
425 aa  403  1e-111  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_1569  protein of unknown function DUF900 hydrolase family protein  52.17 
 
 
435 aa  404  1e-111  Methylocella silvestris BL2  Bacteria  n/a    normal  0.781452 
 
 
-
 
NC_011989  Avi_0517  hypothetical protein  48.48 
 
 
468 aa  399  9.999999999999999e-111  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5143  protein of unknown function DUF900 hydrolase family protein  51.63 
 
 
411 aa  375  1e-103  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_1041  protein of unknown function DUF900 hydrolase family protein  48.47 
 
 
405 aa  367  1e-100  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0813673 
 
 
-
 
NC_011369  Rleg2_4050  protein of unknown function DUF900 hydrolase family protein  49.72 
 
 
408 aa  352  5e-96  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_4254  protein of unknown function DUF900 hydrolase family protein  44.09 
 
 
389 aa  328  8e-89  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.0816597 
 
 
-
 
NC_011989  Avi_1307  hypothetical protein  45.43 
 
 
443 aa  327  3e-88  Agrobacterium vitis S4  Bacteria  normal  0.215851  n/a   
 
 
-
 
NC_009720  Xaut_3189  protein of unknown function DUF900 hydrolase family protein  40.63 
 
 
427 aa  248  2e-64  Xanthobacter autotrophicus Py2  Bacteria  normal  0.0599961  normal  0.155338 
 
 
-
 
NC_009717  Xaut_4919  protein of unknown function DUF900 hydrolase family protein  38.19 
 
 
387 aa  221  1.9999999999999999e-56  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_0644  protein of unknown function DUF900, hydrolase-like  35.31 
 
 
388 aa  210  3e-53  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_1657  protein of unknown function DUF900 hydrolase family protein  38.56 
 
 
408 aa  200  5e-50  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.402224  normal  0.0238523 
 
 
-
 
NC_011368  Rleg2_5370  protein of unknown function DUF900 hydrolase family protein  36.22 
 
 
380 aa  189  1e-46  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.494551 
 
 
-
 
NC_011666  Msil_1075  protein of unknown function DUF900 hydrolase family protein  35.78 
 
 
415 aa  182  1e-44  Methylocella silvestris BL2  Bacteria  n/a    normal  0.290615 
 
 
-
 
NC_012848  Rleg_5090  protein of unknown function DUF900 hydrolase family protein  33.93 
 
 
393 aa  179  9e-44  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0102585 
 
 
-
 
NC_009667  Oant_2445  protein of unknown function DUF900 hydrolase family protein  32.9 
 
 
404 aa  175  1.9999999999999998e-42  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0694595  n/a   
 
 
-
 
NC_009667  Oant_2425  protein of unknown function DUF900 hydrolase family protein  33.76 
 
 
394 aa  167  5e-40  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_2788  protein of unknown function DUF900, hydrolase family protein  35.48 
 
 
357 aa  161  3e-38  Paracoccus denitrificans PD1222  Bacteria  normal  0.118814  normal 
 
 
-
 
NC_008783  BARBAKC583_0646  putative lipoprotein  28.57 
 
 
403 aa  155  1e-36  Bartonella bacilliformis KC583  Bacteria  normal  0.193127  n/a   
 
 
-
 
NC_008347  Mmar10_1990  protein of unknown function DUF900, hydrolase family protein  35.09 
 
 
372 aa  154  4e-36  Maricaulis maris MCS10  Bacteria  normal  0.972188  normal 
 
 
-
 
NC_008044  TM1040_2852  protein of unknown function DUF900, hydrolase-like  31.25 
 
 
373 aa  140  3e-32  Ruegeria sp. TM1040  Bacteria  normal  0.0746757  normal  0.750741 
 
 
-
 
NC_007802  Jann_0188  protein of unknown function DUF900, hydrolase-like  31.85 
 
 
373 aa  139  1e-31  Jannaschia sp. CCS1  Bacteria  normal  0.277973  normal  0.952395 
 
 
-
 
NC_010511  M446_2113  protein of unknown function DUF900 hydrolase family protein  32.01 
 
 
347 aa  135  1.9999999999999998e-30  Methylobacterium sp. 4-46  Bacteria  normal  decreased coverage  0.00719162 
 
 
-
 
NC_007406  Nwi_3042  hypothetical protein  34.7 
 
 
345 aa  129  9.000000000000001e-29  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.747942  normal 
 
 
-
 
NC_011894  Mnod_1085  protein of unknown function DUF900 hydrolase family protein  31.19 
 
 
350 aa  126  9e-28  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011059  Paes_0472  protein of unknown function DUF900 hydrolase family protein  29.14 
 
 
354 aa  125  1e-27  Prosthecochloris aestuarii DSM 271  Bacteria  unclonable  0.0000000004024  normal 
 
 
-
 
NC_011757  Mchl_0343  protein of unknown function DUF900 hydrolase family protein  30.12 
 
 
344 aa  124  2e-27  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.316747  normal 
 
 
-
 
NC_010172  Mext_0299  protein of unknown function DUF900 hydrolase family protein  29.82 
 
 
344 aa  122  9.999999999999999e-27  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.168302 
 
 
-
 
NC_010725  Mpop_0375  protein of unknown function DUF900 hydrolase family protein  36.9 
 
 
344 aa  122  1.9999999999999998e-26  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc0827  hypothetical protein  33.16 
 
 
270 aa  114  3e-24  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_3479  protein of unknown function DUF900 hydrolase family protein  29.93 
 
 
342 aa  113  7.000000000000001e-24  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.216435 
 
 
-
 
NC_008639  Cpha266_2534  protein of unknown function DUF900, hydrolase family protein  30.64 
 
 
360 aa  111  2.0000000000000002e-23  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.0983031  n/a   
 
 
-
 
NC_010627  Bphy_7357  protein of unknown function DUF900 hydrolase family protein  30.77 
 
 
410 aa  109  8.000000000000001e-23  Burkholderia phymatum STM815  Bacteria  normal  0.581401  normal  0.167837 
 
 
-
 
NC_010831  Cphamn1_0519  protein of unknown function DUF900 hydrolase family protein  29.18 
 
 
355 aa  105  1e-21  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_3233  protein of unknown function DUF900 hydrolase family protein  27.47 
 
 
486 aa  102  1e-20  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.139219  n/a   
 
 
-
 
NC_008312  Tery_2076  protein of unknown function DUF900, hydrolase-like  30.4 
 
 
661 aa  102  1e-20  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.445606 
 
 
-
 
NC_010803  Clim_1977  protein of unknown function DUF900 hydrolase family protein  30.1 
 
 
352 aa  101  3e-20  Chlorobium limicola DSM 245  Bacteria  normal  0.574903  n/a   
 
 
-
 
NC_010002  Daci_3550  protein of unknown function DUF900 hydrolase family protein  30.17 
 
 
346 aa  101  3e-20  Delftia acidovorans SPH-1  Bacteria  normal  0.918662  normal  0.02305 
 
 
-
 
NC_009720  Xaut_0234  protein of unknown function DUF900 hydrolase family protein  32.91 
 
 
256 aa  94.4  4e-18  Xanthobacter autotrophicus Py2  Bacteria  normal  0.984696  normal  0.0149347 
 
 
-
 
NC_011060  Ppha_1468  protein of unknown function DUF900 hydrolase family protein  24.69 
 
 
417 aa  94  5e-18  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_0058  protein of unknown function DUF900, hydrolase family protein  29.1 
 
 
442 aa  89.7  1e-16  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_0643  protein of unknown function DUF900, hydrolase-like protein  29.51 
 
 
399 aa  84  0.000000000000005  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.399465  normal  0.101765 
 
 
-
 
NC_009429  Rsph17025_3209  hypothetical protein  29.06 
 
 
368 aa  75.9  0.000000000001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.312893 
 
 
-
 
NC_008783  BARBAKC583_0679  hypothetical protein  34.44 
 
 
169 aa  75.9  0.000000000001  Bartonella bacilliformis KC583  Bacteria  hitchhiker  0.00000679307  n/a   
 
 
-
 
NC_008044  TM1040_1831  protein of unknown function DUF900, hydrolase-like  27.22 
 
 
363 aa  63.2  0.000000009  Ruegeria sp. TM1040  Bacteria  normal  normal  0.798525 
 
 
-
 
NC_007413  Ava_3923  hypothetical protein  25.15 
 
 
384 aa  55.1  0.000002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_4188  protein of unknown function DUF900, hydrolase-like  27.59 
 
 
337 aa  53.5  0.000008  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.90269  normal  0.255036 
 
 
-
 
NC_009783  VIBHAR_00707  hypothetical protein  25.46 
 
 
287 aa  50.1  0.00008  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008340  Mlg_2175  protein of unknown function DUF900, hydrolase family protein  31.06 
 
 
328 aa  48.5  0.0003  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.334078  normal  0.109087 
 
 
-
 
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