Gene Pden_2788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2788 
Symbol 
ID4581367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2807090 
End bp2808163 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content69% 
IMG OID639770114 
Productprotein of unknown function DUF900, hydrolase family protein 
Protein accessionYP_916568 
Protein GI119385512 
COG category[S] Function unknown 
COG ID[COG4782] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.118814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGGGC GGATTCTTGT TGCGTTGCTG TTGTTGCTGC CGGCCTGCGC GCCGCGGGGC 
GAGATCACCG TCGCACCGGA GGCGGCGCGG GTGGGCCATG TCGAGCGCAT CTATGTCGCC
ACCAACCGCA CCCCCGACGG CAGCCGGCAA GAGGGGGTCA GCTTCGGCCG GGTCGATGTC
TCGGTCCCGC CCGAGCGCCG GCCCGGCTCG ATTACCTATC CCCGCCAAGG CGCGAAACCC
GATCCGCAGC GGGATTTCCT GGTCGCGGAA TATGCCCGCT TTGCCCGGCC CGCGGATTTC
CAGGCCGATC TGCGCCGCGC CATTGCCGCG CGCCCTGCGG GCGACCGCGA TGTGGTGCTG
TTCGTGCATG GCTACAACAA CACCTTTGCC GAGGGGCTGT ATCGCTTTGC CCAGATCGAG
CGCGACCTGA GCCTGCCCGG CGTGCCGCTG CATTTCTCAT GGCCATCGCG CGGGCAGCCG
CTGGCCTATG CGGCGGATCG CGACAGCGTG CTTTATTCGC GCGACGGACT TGCACGCAGC
ATCGGCATCG CTGCCGAAGC CGGCGGCGGC AAGGCGATCC TGGTCGGGCA TTCCATGGGC
GCCCTGCTGC TGATGGAGAG CCTGCGCCAG ATGGCCATCG CGGGCGAGCG CCGCACCCTG
GACCGGATCG GCGCGGTGGT GCTGTTGTCG CCCGATATCG ATGTCGGGGT CTTTCGCACA
CAGGTGCGGG CCATCGGCAG GCTGCCGCAG CCCTTCGTCA TCTTCACTTC GGGGCGGGAT
CGGGCGCTGA ACCTTTCGGC GCTGATCTCG GCCGAGCCGG TGCGGCTGGG CAGCCTGACC
GATGCCGGGC CGGTGGCGGA CCTGCCGGTG ATGCTGGTCG ATGTCGGCGC CTTTTCGACC
GGGGACGGGC ATTTCAATGT CGCGACCTCG CCGGCGCTGC TGCGCATCCT GTCGCAGGCG
CAGGAACTGA ACAGCGTGTT TTCCTCGGAC GTGGGCGGTG GAGTCGGGCC GCTGACCCGT
GCGGCGCTGC ATGCCGAGCG GGCGGCGCAG ATCGTGATCT CGCCGGCCTT CTAG
 
Protein sequence
MPGRILVALL LLLPACAPRG EITVAPEAAR VGHVERIYVA TNRTPDGSRQ EGVSFGRVDV 
SVPPERRPGS ITYPRQGAKP DPQRDFLVAE YARFARPADF QADLRRAIAA RPAGDRDVVL
FVHGYNNTFA EGLYRFAQIE RDLSLPGVPL HFSWPSRGQP LAYAADRDSV LYSRDGLARS
IGIAAEAGGG KAILVGHSMG ALLLMESLRQ MAIAGERRTL DRIGAVVLLS PDIDVGVFRT
QVRAIGRLPQ PFVIFTSGRD RALNLSALIS AEPVRLGSLT DAGPVADLPV MLVDVGAFST
GDGHFNVATS PALLRILSQA QELNSVFSSD VGGGVGPLTR AALHAERAAQ IVISPAF