| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1468 |
|---|
| Symbol | |
|---|
| ID | 6463537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 1546997 |
|---|
| End bp | 1548250 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 642727696 |
|---|
| Product | protein of unknown function DUF900 hydrolase family protein |
|---|
| Protein accession | YP_002018337 |
|---|
| Protein GI | 194336543 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4782] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAAT CAGACGTTCT GACACAAGCA ATTGCTGATA TTTGGGATAA GATAGTAATT
AATTCTGGTA GTGATTATGA GCTTTTCGAG TCTGAACTTT TGACACTGTT GCGCCTTCTT
GAGGGCTCTA AAGGTAGAGA AGAGGAGTTA GTGCAGGGTT TAATTTTTGC TTTGTTTAAA
CGATTCGATG CAGCTTATAC CCTGCTCAAT CAGGCAATTG CACCATATCA AGCGAAAGGC
CCAGCTCAGT TTTGTGATGG TGTTAAAAAG CACCGCTATG TTTCTGTACC CGTTTTTTAT
GGCACGGATC GAGCCTTTGT TGACAAGGTT GACGGAGCCG TTATTTATGG TTCTGAACGT
GACGATCTTT CTTTTGGCAT TGCCAAAGTA AGCATTCCTG ATGATCATAG GATGGGGAAG
ATAGAAAAAA TGAACTTGTG GAGACTGCAA TTTCGCGAAG ATCCTGAGAA GCATATCGTA
TTGTTGGGAG TTGAAACATT ACCGATAGAG ACGTTTGAGA TAAATGTACA AAATGCGCTG
AAGCAGAGTT CAAAGAAAGA GGTTATGATT TTCGTGCATG GTTACTATAC AGGATTTGTT
GATGCGCTCA CTCGTGCAGC ACAAATCGCT TATGATCTTA AATTTGAAGG TTTTATAGGA
TTGTATAGTT GGCCTTCTGA GGGAGCTCGT ACCAAATATG TGGTAGATGA AACCAATGTT
AAATGGTCAT GCCCTCAGTT TGTAGATTTC TTGCGCGTCG TTAGAGAGAA CTTGGGCGCA
GAGAAGATTC ATATTATTGC TCATAGTATG GGAGCCCAGT TGATTGTCGA CACTCTTGCT
TTTATGACCT CTTCCTTGGA TACACAGCAA GCAAGTATCG GTCAAGTCGT TTTTGCTGCT
CCCGATATTG ATGCCTCAAT ATTTAAAAAC CTTGCTGGTC ACTTTAGCAA GAAAGCTGAC
CAGTTTACTT TGTATGCTTC ATCGAATGAC AAAGCTATCA TGGCTTCAAA AATGTTTCAT
AAGTACCCTC GAGCGGGCGA TTCTGGCTTG GGTTTAGTGA TAGTTCCTTC AGTTGACACC
GTCGATGTCA CTGCTATAAA TACGAGTATG GATGGACATT CTTATTTCGG AGACAATCGG
TCGGTTTTGA CTGATATTTT TGAACTCATT AAGCACGGCT CTCATCCTCA AGACAGAGCT
GGACTTGTCG CAAAGAAGAG ATATGGGAAA CAATACTGGG AGTTTATTTC GTAG
|
|---|
| Protein sequence | MIKSDVLTQA IADIWDKIVI NSGSDYELFE SELLTLLRLL EGSKGREEEL VQGLIFALFK
RFDAAYTLLN QAIAPYQAKG PAQFCDGVKK HRYVSVPVFY GTDRAFVDKV DGAVIYGSER
DDLSFGIAKV SIPDDHRMGK IEKMNLWRLQ FREDPEKHIV LLGVETLPIE TFEINVQNAL
KQSSKKEVMI FVHGYYTGFV DALTRAAQIA YDLKFEGFIG LYSWPSEGAR TKYVVDETNV
KWSCPQFVDF LRVVRENLGA EKIHIIAHSM GAQLIVDTLA FMTSSLDTQQ ASIGQVVFAA
PDIDASIFKN LAGHFSKKAD QFTLYASSND KAIMASKMFH KYPRAGDSGL GLVIVPSVDT
VDVTAINTSM DGHSYFGDNR SVLTDIFELI KHGSHPQDRA GLVAKKRYGK QYWEFIS
|
|---|
| |