Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1831 |
Symbol | |
ID | 4076977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 1927865 |
End bp | 1928956 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638007146 |
Product | protein of unknown function DUF900, hydrolase-like |
Protein accession | YP_613826 |
Protein GI | 99081672 |
COG category | [S] Function unknown |
COG ID | [COG4782] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.798525 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACAT TTCTGCCAGC CGTTGCCCGT TCGATATCTG TGATCCTCTG CCTTGGCGGT CCATTTGGCG TGATCCCCGC GCCACTGGCG GCCCAGTCTG AGGCTCAATC GGAGGCCCAA TCTGAAACCC AGTCGGAGAT TGAGGTTGCA GAGTTTCCCT ATGTCACGCT CCGGAACCGG ACCGGATCTG ATGATCCGGC GGAGTTCTAC GCAGGTGAGC GCAGTGATCC CAAAGCCGGC CGCTGTCGCG TCGAAGAACT CGACCTTGGC GTGCTTGCGC CCCTTGCCGG TGTCGCTCCG AATTTCCTGC GCGAGGAGCT GTTGCGCGTT CAGGCCATAG AGGAGGCCCC CACCGGCGCC ATTCTGGACC AGCTCGAAGC GACCGCCGGG GCACAGGGGC CTGCGCTCTA TGTCCATGGC TACTACATCA GTTTTGAAAA AGGCTGCCGC CGGGCTGCGC TGTTGCAGCA GAACGCGGAC CTTGAGGGGC GGCTTTTGTG GTTCAGCTGG CCCTCGGATG GGGCCGCCGC CTATTACACG CACGATGAGG TCGATCTCTA TTGGAGCCTG CCGGACCTCG CGGACACGAT TATCGAATTA CACGAGCGCT TTGGCCCCGG CGAGGTTGCG GTCATGGGGC ACAGCCTCGG GGCGCGCGGG GTCGTGCTGG CGCTGGCCGA GGTGGCCAAT CGGCGCCCCG ATATGCAGCT GGGTCAGGTC GTGCTGCTGG CGCCGGATAT GGACTTTGGG ATCTTTGAAC GCATCCTGCC ACGCATTCGC CCAATCGCAG AAAACCTGAC CATCTATGTC ACCAGCGGTG ACCGACCGCT TGCGCTTTCG GCGCAAGTGC ATGGCTACCC GCGGCTCGGG GAGGCGGGAA ACCCGGTGTC GCGTCTCACG GGCGTCGAGG TGATCGATCT GAGCGACTTG CCCAGCGAAG GCCCGACGGG GCACCTCTAT CATATCTACA GCCAGATCGT GGGCGCGGAT CTGAGCCGGC TTTTGCGCAG CGGCGAGGGG GCGTCCGAGC GTCCGGGCCT TGTGGCTCAG AGCAAAAACC TATGGCGCCT CAGGCCTGAA AAACGCGAGT AG
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Protein sequence | MKTFLPAVAR SISVILCLGG PFGVIPAPLA AQSEAQSEAQ SETQSEIEVA EFPYVTLRNR TGSDDPAEFY AGERSDPKAG RCRVEELDLG VLAPLAGVAP NFLREELLRV QAIEEAPTGA ILDQLEATAG AQGPALYVHG YYISFEKGCR RAALLQQNAD LEGRLLWFSW PSDGAAAYYT HDEVDLYWSL PDLADTIIEL HERFGPGEVA VMGHSLGARG VVLALAEVAN RRPDMQLGQV VLLAPDMDFG IFERILPRIR PIAENLTIYV TSGDRPLALS AQVHGYPRLG EAGNPVSRLT GVEVIDLSDL PSEGPTGHLY HIYSQIVGAD LSRLLRSGEG ASERPGLVAQ SKNLWRLRPE KRE
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