60 homologs were found in PanDaTox collection
for query gene RSc0827 on replicon NC_003295
Organism: Ralstonia solanacearum GMI1000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003295  RSc0827  hypothetical protein  100 
 
 
270 aa  556  1e-157  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_010627  Bphy_7357  protein of unknown function DUF900 hydrolase family protein  59.19 
 
 
410 aa  330  2e-89  Burkholderia phymatum STM815  Bacteria  normal  0.581401  normal  0.167837 
 
 
-
 
NC_010831  Cphamn1_0519  protein of unknown function DUF900 hydrolase family protein  44.78 
 
 
355 aa  251  8.000000000000001e-66  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_008639  Cpha266_2534  protein of unknown function DUF900, hydrolase family protein  41.73 
 
 
360 aa  225  7e-58  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.0983031  n/a   
 
 
-
 
NC_010803  Clim_1977  protein of unknown function DUF900 hydrolase family protein  43.77 
 
 
352 aa  224  1e-57  Chlorobium limicola DSM 245  Bacteria  normal  0.574903  n/a   
 
 
-
 
NC_011060  Ppha_1468  protein of unknown function DUF900 hydrolase family protein  39.55 
 
 
417 aa  214  1.9999999999999998e-54  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011059  Paes_0472  protein of unknown function DUF900 hydrolase family protein  40.23 
 
 
354 aa  211  1e-53  Prosthecochloris aestuarii DSM 271  Bacteria  unclonable  0.0000000004024  normal 
 
 
-
 
NC_008312  Tery_2076  protein of unknown function DUF900, hydrolase-like  43.57 
 
 
661 aa  186  4e-46  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.445606 
 
 
-
 
NC_014148  Plim_3233  protein of unknown function DUF900 hydrolase family protein  40.08 
 
 
486 aa  184  9e-46  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.139219  n/a   
 
 
-
 
NC_009720  Xaut_0234  protein of unknown function DUF900 hydrolase family protein  39.45 
 
 
256 aa  176  4e-43  Xanthobacter autotrophicus Py2  Bacteria  normal  0.984696  normal  0.0149347 
 
 
-
 
NC_010002  Daci_3550  protein of unknown function DUF900 hydrolase family protein  37.3 
 
 
346 aa  158  8e-38  Delftia acidovorans SPH-1  Bacteria  normal  0.918662  normal  0.02305 
 
 
-
 
NC_008639  Cpha266_0058  protein of unknown function DUF900, hydrolase family protein  33.83 
 
 
442 aa  131  1.0000000000000001e-29  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_0885  protein of unknown function DUF900 hydrolase family protein  38.14 
 
 
418 aa  125  6e-28  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.451232  normal  0.150785 
 
 
-
 
NC_008044  TM1040_1831  protein of unknown function DUF900, hydrolase-like  32.09 
 
 
363 aa  123  4e-27  Ruegeria sp. TM1040  Bacteria  normal  normal  0.798525 
 
 
-
 
NC_010505  Mrad2831_3479  protein of unknown function DUF900 hydrolase family protein  35.51 
 
 
342 aa  120  1.9999999999999998e-26  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.216435 
 
 
-
 
NC_011894  Mnod_1085  protein of unknown function DUF900 hydrolase family protein  35.35 
 
 
350 aa  118  9.999999999999999e-26  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5104  protein of unknown function DUF900 hydrolase family protein  33.68 
 
 
433 aa  115  6.9999999999999995e-25  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4880  protein of unknown function DUF900 hydrolase family protein  33.16 
 
 
444 aa  114  1.0000000000000001e-24  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.729214 
 
 
-
 
NC_009667  Oant_2425  protein of unknown function DUF900 hydrolase family protein  37.17 
 
 
394 aa  114  1.0000000000000001e-24  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_4413  protein of unknown function DUF900 hydrolase family protein  35.42 
 
 
423 aa  115  1.0000000000000001e-24  Xanthobacter autotrophicus Py2  Bacteria  normal  0.212754  normal 
 
 
-
 
NC_012858  Rleg_6957  protein of unknown function DUF900 hydrolase family protein  34.18 
 
 
425 aa  114  2.0000000000000002e-24  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_2113  protein of unknown function DUF900 hydrolase family protein  35.35 
 
 
347 aa  112  5e-24  Methylobacterium sp. 4-46  Bacteria  normal  decreased coverage  0.00719162 
 
 
-
 
NC_008783  BARBAKC583_0646  putative lipoprotein  34.65 
 
 
403 aa  112  5e-24  Bartonella bacilliformis KC583  Bacteria  normal  0.193127  n/a   
 
 
-
 
NC_008254  Meso_0644  protein of unknown function DUF900, hydrolase-like  33.33 
 
 
388 aa  112  5e-24  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_2400  protein of unknown function DUF900 hydrolase family protein  33.17 
 
 
471 aa  112  8.000000000000001e-24  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.506221  hitchhiker  0.0050611 
 
 
-
 
NC_011666  Msil_1569  protein of unknown function DUF900 hydrolase family protein  34.9 
 
 
435 aa  110  2.0000000000000002e-23  Methylocella silvestris BL2  Bacteria  n/a    normal  0.781452 
 
 
-
 
NC_011757  Mchl_0343  protein of unknown function DUF900 hydrolase family protein  33.17 
 
 
344 aa  110  2.0000000000000002e-23  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.316747  normal 
 
 
-
 
NC_010172  Mext_0299  protein of unknown function DUF900 hydrolase family protein  33.17 
 
 
344 aa  110  2.0000000000000002e-23  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.168302 
 
 
-
 
NC_012850  Rleg_0115  protein of unknown function DUF900 hydrolase family protein  35.26 
 
 
425 aa  110  3e-23  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.958101  normal 
 
 
-
 
NC_010725  Mpop_0375  protein of unknown function DUF900 hydrolase family protein  33.65 
 
 
344 aa  110  3e-23  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_3042  hypothetical protein  31.12 
 
 
345 aa  109  4.0000000000000004e-23  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.747942  normal 
 
 
-
 
NC_009720  Xaut_3189  protein of unknown function DUF900 hydrolase family protein  35 
 
 
427 aa  107  2e-22  Xanthobacter autotrophicus Py2  Bacteria  normal  0.0599961  normal  0.155338 
 
 
-
 
NC_011369  Rleg2_0105  protein of unknown function DUF900 hydrolase family protein  34.74 
 
 
425 aa  107  2e-22  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_1657  protein of unknown function DUF900 hydrolase family protein  31.8 
 
 
408 aa  106  3e-22  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.402224  normal  0.0238523 
 
 
-
 
NC_009667  Oant_0425  protein of unknown function DUF900 hydrolase family protein  33.54 
 
 
416 aa  105  6e-22  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_004310  BR0328  putative lipoprotein  32.1 
 
 
413 aa  105  1e-21  Brucella suis 1330  Bacteria  normal  0.221283  n/a   
 
 
-
 
NC_008686  Pden_2788  protein of unknown function DUF900, hydrolase family protein  33.51 
 
 
357 aa  105  1e-21  Paracoccus denitrificans PD1222  Bacteria  normal  0.118814  normal 
 
 
-
 
NC_011666  Msil_1041  protein of unknown function DUF900 hydrolase family protein  34.16 
 
 
405 aa  103  2e-21  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0813673 
 
 
-
 
NC_009667  Oant_2445  protein of unknown function DUF900 hydrolase family protein  34.63 
 
 
404 aa  102  6e-21  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0694595  n/a   
 
 
-
 
NC_011989  Avi_1307  hypothetical protein  27.42 
 
 
443 aa  102  7e-21  Agrobacterium vitis S4  Bacteria  normal  0.215851  n/a   
 
 
-
 
NC_009620  Smed_3785  protein of unknown function DUF900 hydrolase family protein  34.84 
 
 
422 aa  102  1e-20  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.658591 
 
 
-
 
NC_011369  Rleg2_4050  protein of unknown function DUF900 hydrolase family protein  33.76 
 
 
408 aa  101  1e-20  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_5370  protein of unknown function DUF900 hydrolase family protein  33.16 
 
 
380 aa  100  3e-20  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.494551 
 
 
-
 
NC_012848  Rleg_5090  protein of unknown function DUF900 hydrolase family protein  32.28 
 
 
393 aa  99.8  4e-20  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0102585 
 
 
-
 
NC_012848  Rleg_5143  protein of unknown function DUF900 hydrolase family protein  34.39 
 
 
411 aa  99.4  5e-20  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009717  Xaut_4919  protein of unknown function DUF900 hydrolase family protein  30.57 
 
 
387 aa  99  7e-20  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_1075  protein of unknown function DUF900 hydrolase family protein  29.17 
 
 
415 aa  99  7e-20  Methylocella silvestris BL2  Bacteria  n/a    normal  0.290615 
 
 
-
 
NC_007802  Jann_0188  protein of unknown function DUF900, hydrolase-like  33.71 
 
 
373 aa  98.2  1e-19  Jannaschia sp. CCS1  Bacteria  normal  0.277973  normal  0.952395 
 
 
-
 
NC_008044  TM1040_2852  protein of unknown function DUF900, hydrolase-like  32.34 
 
 
373 aa  96.3  4e-19  Ruegeria sp. TM1040  Bacteria  normal  0.0746757  normal  0.750741 
 
 
-
 
NC_011989  Avi_0517  hypothetical protein  28.78 
 
 
468 aa  94.7  1e-18  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_4254  protein of unknown function DUF900 hydrolase family protein  30.21 
 
 
389 aa  94.7  1e-18  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.0816597 
 
 
-
 
NC_008048  Sala_0643  protein of unknown function DUF900, hydrolase-like protein  31.88 
 
 
399 aa  89  7e-17  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.399465  normal  0.101765 
 
 
-
 
NC_008347  Mmar10_1990  protein of unknown function DUF900, hydrolase family protein  33 
 
 
372 aa  87.4  2e-16  Maricaulis maris MCS10  Bacteria  normal  0.972188  normal 
 
 
-
 
NC_008009  Acid345_4188  protein of unknown function DUF900, hydrolase-like  29.02 
 
 
337 aa  58.2  0.0000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.90269  normal  0.255036 
 
 
-
 
NC_008783  BARBAKC583_0679  hypothetical protein  34.31 
 
 
169 aa  52.4  0.000009  Bartonella bacilliformis KC583  Bacteria  hitchhiker  0.00000679307  n/a   
 
 
-
 
NC_007413  Ava_3923  hypothetical protein  24.03 
 
 
384 aa  44.3  0.002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_2175  protein of unknown function DUF900, hydrolase family protein  25.74 
 
 
328 aa  44.7  0.002  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.334078  normal  0.109087 
 
 
-
 
NC_009783  VIBHAR_00707  hypothetical protein  26.69 
 
 
287 aa  43.9  0.003  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009429  Rsph17025_3209  hypothetical protein  23.59 
 
 
368 aa  43.1  0.005  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.312893 
 
 
-
 
NC_009959  Dshi_4207  protein of unknown function DUF900 hydrolase family protein  25.31 
 
 
323 aa  42  0.01  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
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