6 homologs were found in PanDaTox collection
for query gene Smal_2213 on replicon NC_011071
Organism: Stenotrophomonas maltophilia R551-3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011071  Smal_2213  General secretion pathway L  100 
 
 
387 aa  734    Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_3177  type II secretion system protein  30.95 
 
 
381 aa  112  1.0000000000000001e-23  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.633159  normal  0.0234949 
 
 
-
 
NC_009656  PSPA7_4827  type II secretion system protein  29.06 
 
 
399 aa  76.6  0.0000000000007  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_55470  type II secretion system protein  27.3 
 
 
380 aa  65.5  0.000000002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.105351  normal  0.115887 
 
 
-
 
NC_007614  Nmul_A1893  general secretion pathway L  25.61 
 
 
404 aa  56.6  0.0000007  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.747419  n/a   
 
 
-
 
NC_011138  MADE_03964  general secretion pathway protein L  30.77 
 
 
399 aa  47.4  0.0004  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
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