Gene Smal_2213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2213 
Symbol 
ID6476544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2490537 
End bp2491700 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content71% 
IMG OID642731395 
ProductGeneral secretion pathway L 
Protein accessionYP_002028600 
Protein GI194365990 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3297] Type II secretory pathway, component PulL 
TIGRFAM ID[TIGR01709] general secretion pathway protein L 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTGC AGCTGAGGGT GCGCCTGCCG GCGCTGGAAC GCCTGTGTGC CGACAGTGCG 
GTTGAGTGGG CGCAGTTGCA CAAGGGTGGG GTGCTGGCCA AGGGCCGCGA CGCATTGGCC
GTGCTGGGTC AGCGTCATCC GCAGGCAGGG GTGCTGGCCT GCCTCGATCC GCAGGATCTG
ATCCTGCTGG AGCTGCAGCT GCCGCCGCTG TCGGGCCGCA GGCTGCAGGC CGCGTTGCAG
GGTGAAGTGG AGGCGATGCT GCTGGATGAC CTGCAGGAGG TCGCGCTGGC GCATGGTACC
CAGGCGGCCG ATGGCAGCGT GCCGGTGGCC TGGCTCGGGC AGCAGGCGAT CATGCAGGCG
CAGCAGCTGC TGGCCTCGTG CGCACTGCAG CTTCAGGCGC TGTATCCGAC GCCGCTGCTG
CTGCCGTGGC AGAACGGCCA GGCAACGCTG CAGGCTGACG GTGAGCATCT GCTGGTGCGC
TGCGGGCGCG ATCGTGGCGT TGTGCAGTGG TGCGGTGGGC GCGACGTGGG GGCGGTGCTG
CAGTCGCTCG CGGCGCGCCT GCAGCAATCC GGGGTGCAGG CCGTGCAATG GATCGACAGC
GTGCCGTCGG TGTGGCCGGA GAGTCTGCCG GCAACCGTGG TCGCGCATGA ACTACAGGCG
TGCGGCCCCC TGCCAGCGTG GTCGTTGCCA CTGCCGGGCC GCAGCAGGCA GGCACCGCGG
TTGGCAGTCG GCCTGGCAGT GGCGGCGCTG GTGCTGGCGG CGCTGGGCCT GCAGCTGCAG
GTCTCGCGCT GGCGCAGCGA GGGCGAGGCG CTGCAGCAGG ACATGGCGCG GCAGTTCAGT
GCGCGCTTCC CGGAGATCAC CGATGTGGTG GACCCGGTAC TGCAGGCGCG GCGCGCGCTG
GCGGTGCCGT TGCCGGCGCC GCCGTTGCCA CCGGTGCAGC GGCAGGTTGC CACCACACTG
CAGGCAGTGC CGGAGCTGGG TGGTCAGGTG CGTGGTCTGC ATTACACGCC GGGCCAGCTG
GAACTGGAGC TGGATGACAA CGCACGGATA TTGGCCGATG ACGCACAACG GCTGGAGCAA
TGGCAGCAGG CCGTACAGGC GCAGGGTCTG CAACTGGTGC GGGACGCGGG CGGCCGCCTG
CGCGTGAGCG GGGGCGGGCA GTGA
 
Protein sequence
MSVQLRVRLP ALERLCADSA VEWAQLHKGG VLAKGRDALA VLGQRHPQAG VLACLDPQDL 
ILLELQLPPL SGRRLQAALQ GEVEAMLLDD LQEVALAHGT QAADGSVPVA WLGQQAIMQA
QQLLASCALQ LQALYPTPLL LPWQNGQATL QADGEHLLVR CGRDRGVVQW CGGRDVGAVL
QSLAARLQQS GVQAVQWIDS VPSVWPESLP ATVVAHELQA CGPLPAWSLP LPGRSRQAPR
LAVGLAVAAL VLAALGLQLQ VSRWRSEGEA LQQDMARQFS ARFPEITDVV DPVLQARRAL
AVPLPAPPLP PVQRQVATTL QAVPELGGQV RGLHYTPGQL ELELDDNARI LADDAQRLEQ
WQQAVQAQGL QLVRDAGGRL RVSGGGQ