10 homologs were found in PanDaTox collection
for query gene Pfl01_3177 on replicon NC_007492
Organism: Pseudomonas fluorescens Pf0-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007492  Pfl01_3177  type II secretion system protein  100 
 
 		 381 aa  763    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.633159  normal  0.0234949 
 
 
-
 
NC_009656  PSPA7_4827  type II secretion system protein  39.7 
 
 		 399 aa  186  8e-46  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_55470  type II secretion system protein  39.66 
 
 		 380 aa  156  4e-37  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.105351  normal  0.115887 
 
 
-
 
NC_011071  Smal_2213  General secretion pathway L  30.95 
 
 		 387 aa  102  9e-21  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007510  Bcep18194_A3235  general secretion pathway L protein  26.76 
 
 		 453 aa  48.1  0.0003  Burkholderia sp. 383  Bacteria  normal  0.116382  normal  1 
 
 
-
 
NC_010508  Bcenmc03_0072  general secretion pathway protein L  26.06 
 
 		 457 aa  46.6  0.0008  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.73764  normal  1 
 
 
-
 
NC_003295  RSc3111  general secretory pathway L transmembrane protein  30.77 
 
 		 476 aa  46.2  0.001  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008060  Bcen_0017  general secretion pathway L  26.06 
 
 		 457 aa  46.2  0.001  Burkholderia cenocepacia AU 1054  Bacteria  decreased coverage  0.00266304  n/a   
 
 
-
 
NC_008542  Bcen2424_0053  general secretion pathway protein L  26.06 
 
 		 457 aa  46.2  0.001  Burkholderia cenocepacia HI2424  Bacteria  normal  0.263684  n/a   
 
 
-
 
NC_010084  Bmul_0054  general secretion pathway protein L  24.65 
 
 		 468 aa  43.9  0.004  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  1 
 
 
-
 
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