Gene Bcenmc03_0072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0072 
Symbol 
ID6121755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp84916 
End bp86289 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content74% 
IMG OID641636619 
Productgeneral secretion pathway protein L 
Protein accessionYP_001763374 
Protein GI170731427 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3297] Type II secretory pathway, component PulL 
TIGRFAM ID[TIGR01709] general secretion pathway protein L 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.73764 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACGT TGATTGTTTC TTTGCCGCCG CGCGAGCCTG CCGTGCCGTT GCAGGAATGG 
CAGTGGCCCG AGCTGCCGTT CACGCTCGTC GACAAGGCCG GCCAGGTGCA GCGCGCGGGC
CGCGCCGCGC TCGCGCTGCT GCCGCGCGCG AACGCGACGG TGCTGATCGT CGCCGCGCGC
GACGTGCTGC TGCTGGCCGC GACCGTGCCG CCGCTGAAGG GGCCGAAGCT GCGCCAGGCG
CTGCCCAACA TCGTCGAGGA TCAGCTGATC CAGGACCCGC TCGGCTGCCA CATCGCGCTC
GATCCGGCCG CGCTGCCCGA CGGGCGTCGC GTACTGGCCG TCGTCGACCG CGCGTGGTTC
CGCACGATCT GCGACGCGTT CACCGCGGCC GGCCACCGGC ACCTGAGCGC GGTGCCTGCG
ACCCGCTGCC TGCCGGCGCC GCGTGCGTCG GCCGAAGCGG CCTCCGCTGG GGCGGCCGAC
GGCCACGCTA CCGACGCGGC CGCGCTCGTC GCGGACGTCA CCGAGCCGCC TGCCCGCCCG
CCGACGGTCG CCGCGGTGCT CGGACTCGCG ACGGCGGTCG AACCGGTGCT CGTCGAAGCT
GGCGCGCTGC CGGCCGCGGC CGGGGCGCCG CGCCTCGAGC TGGCGGTCGC GCGCGGCGCG
CTCGGCGAAG GCTTCGCGGC GCCCGCGTCG CGCGCGGCCG GCACGCTGGC CGCGCTCGCG
GGCGGCGGCG ACGTCGAACT GTACGAACTC GGCGAGCCGG GCGCGGAGCC GCGGCTCGCG
TCGGTCGGCC GCACCGACGC GCCGCTGTTG CCGGGCGCCG CGCCGCTGTC GTTCGACACG
TTCGCGCGCC GGGCGCTGAC CGAACCATTC GATCTGTGCC AGTTCGAATT CGAATCGCAG
CCGTGGCGCT TCGACCGCGC GACGGTGAAG CGCCTGCGCG TGCCGATCGC GCTGGCCGCG
GCGACGCTCG GCGTCGCGGT GATCGGGATG AACCTGCACT GGTGGAAGCT GTCACGCGAG
CGCGATGCGC TGTCCGCGCA GATCACCGAG ACGCTCTTGT CCGCGTTCCC GAAGACGACC
ACCGTGCTCG ATCCGCCCGC GCAGATGCAG CGCCAGCTCG ACCAGCTTCG GCTGGCTGCC
GGCGAGCTGT CGCCGAACGA TTTCCTCGCG CTGTCGAGCG GCTTGTCGCG CTCGATGGGC
GCGCTGCCGC TGAACGGCAT CGCGTCGCTC GACTATCACG ACCGGCGGCT CGACGTCGGC
TTCAAGCCGG AGGTCAAGGT CGATCCCGAT TTCACGCAGC GCCTCGCGCG TAACGGACTG
TCCGGCGAAG TCGACAGCAA CACGGGCAAA TGGACGATCC GGAGCCGCTC ATGA
 
Protein sequence
MSTLIVSLPP REPAVPLQEW QWPELPFTLV DKAGQVQRAG RAALALLPRA NATVLIVAAR 
DVLLLAATVP PLKGPKLRQA LPNIVEDQLI QDPLGCHIAL DPAALPDGRR VLAVVDRAWF
RTICDAFTAA GHRHLSAVPA TRCLPAPRAS AEAASAGAAD GHATDAAALV ADVTEPPARP
PTVAAVLGLA TAVEPVLVEA GALPAAAGAP RLELAVARGA LGEGFAAPAS RAAGTLAALA
GGGDVELYEL GEPGAEPRLA SVGRTDAPLL PGAAPLSFDT FARRALTEPF DLCQFEFESQ
PWRFDRATVK RLRVPIALAA ATLGVAVIGM NLHWWKLSRE RDALSAQITE TLLSAFPKTT
TVLDPPAQMQ RQLDQLRLAA GELSPNDFLA LSSGLSRSMG ALPLNGIASL DYHDRRLDVG
FKPEVKVDPD FTQRLARNGL SGEVDSNTGK WTIRSRS