7 homologs were found in PanDaTox collection
for query gene Slin_2309 on replicon NC_013730
Organism: Spirosoma linguale DSM 74



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013730  Slin_2309  hypothetical protein  100 
 
 
174 aa  361  4e-99  Spirosoma linguale DSM 74  Bacteria  normal  hitchhiker  0.0021914 
 
 
-
 
NC_013730  Slin_5090  TonB family protein  57.14 
 
 
274 aa  55.8  0.0000003  Spirosoma linguale DSM 74  Bacteria  decreased coverage  0.00113498  normal 
 
 
-
 
NC_013037  Dfer_5150  TonB family protein  47.73 
 
 
288 aa  53.5  0.000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.10123  normal 
 
 
-
 
NC_008255  CHU_2015  tonB protein  50 
 
 
276 aa  52.8  0.000003  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.138259  normal 
 
 
-
 
NC_013132  Cpin_1429  TonB family protein  55 
 
 
279 aa  51.2  0.000007  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.369951  normal 
 
 
-
 
NC_013037  Dfer_4058  TonB family protein  50 
 
 
274 aa  48.9  0.00003  Dyadobacter fermentans DSM 18053  Bacteria  hitchhiker  0.00000345217  hitchhiker  0.000000306076 
 
 
-
 
NC_013132  Cpin_1470  TonB family protein  47.5 
 
 
279 aa  45.1  0.0005  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>