| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2015 |
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| Symbol | tonB |
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| ID | 4187116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2349436 |
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| End bp | 2350266 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638072018 |
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| Product | tonB protein |
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| Protein accession | YP_678623 |
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| Protein GI | 110638414 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.138259 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAAAGG AACTGGACTT ATATAAAGCT ACTTTAGACG AGATTGTTTT TGAAGACAGA
AATAAATCGT ACGGCGGCTA TTTTCTTCGT GTATTATATG ACATCAATGT AACGAAGGCT
ACGATTATCA CCTGCGCAAG TTTCATACTT CTTATGGCTG GCATCAACTT CTATTTAACC
ATTACAGCAA AGCCTGTAGA GGCATATGTG CCGGTTGAAA TTAAGATGGA TATTACAGAT
GAGCCGTTAA AAGATGAAGA AATTAAAAAA TTACCGCCTC CGCCTCCAAA AGTTGAGCAG
CCTAAAATTG AACAGGTTAA GTTTTTACCT CCGGTTATCA AACCAGATAA TAAAGTGGTA
AAAGAGGAGC AGATGAAAGA ACTTGATTCT CTTTTAAACA CAAACATTTC GAATAAAAAT
GTAGAAGGTG AAAAAGGTAA AATTGATCCG TTTGCCAATG ATGGTGATGA GAATGGTAAA
TTAGGCGGTA CAGGTGAAAA AGAAGCGGAA GTATTCTTAT TTGCGGGTGA AATGCCTAAA
TTTAAAGGCG GCGGCGATGA AGAAGTAATT AAGTATGTTC AAGGCAGACT TATTTACCCG
GCTGATGCCA AAAACAAAAA AATTGAAGGT ACTGTTTTTG TTCAATATAC AATCACTGCA
ACAGGTGAAG TGACCAATGT ACATATTGTA CCCGGAAGAG GGCTTGATGC CTCTATTGAT
GCAGAAGCTG TGCGTGTTAT AAAGGGAATG CCGAAATGGG AACCGGGAAA AAATAACGGA
ACTCCTGTAG CTGTTAAAAA AGTTGCACGT ATTAAATTCT CTTTGAACTA G
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| Protein sequence | MEKELDLYKA TLDEIVFEDR NKSYGGYFLR VLYDINVTKA TIITCASFIL LMAGINFYLT
ITAKPVEAYV PVEIKMDITD EPLKDEEIKK LPPPPPKVEQ PKIEQVKFLP PVIKPDNKVV
KEEQMKELDS LLNTNISNKN VEGEKGKIDP FANDGDENGK LGGTGEKEAE VFLFAGEMPK
FKGGGDEEVI KYVQGRLIYP ADAKNKKIEG TVFVQYTITA TGEVTNVHIV PGRGLDASID
AEAVRVIKGM PKWEPGKNNG TPVAVKKVAR IKFSLN
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