| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1429 |
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| Symbol | |
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| ID | 8357570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1740156 |
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| End bp | 1740995 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644963609 |
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| Product | TonB family protein |
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| Protein accession | YP_003121127 |
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| Protein GI | 256420474 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.369951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTCCG CTAAAGTCTT AAAGTCCGAT TTTCTGGATA TCCTGTTTGA GAACAGGAAT
AAGGAATATG GGGCTTATGA CCTCAGAAGA CAATACGACA AAAGGGTACG TAACGCCGTT
ATCGGTAGTG CTGCACTGAT GTTGGTTGTA ATCGCAGGTT ATGCAATCAG TAATTATATC
AACAAATTAG AACGGGAGAA TCCTGATAGG AAACCTGTTA TAGAGCAGAT CAAAATGGAG
GACGTGAAGA TTCCGGATGA TCCGAAAACT CCACCTCCGC CTCCACCGCC ACCTGCTCCA
CCGCCACCGG TGAAACCATC CGTACAATTC ACTCCTCCCG TAATCAAGAA GGATGAAGAA
GTACCAGAAG ATGAAGTACC GCCTAAAATC AAGGAAATTG AGAATAAGGC AATCAGTACT
AAAACTGTAG AAGGTGATCC TAACGGTATC GATCCGGGAT TACTGGAAGA TAGTAAAGGT
ACTGGTGTGG TAGAAGCTCC TCCTCCTCCT CCAAAAGAAG AGATCTTCAC CTTCGTAGAA
CAGCCGCCTA CCTTCCCTGG TGGTGAGGAA GCGCTGGCTA AGTTCCTGAG CAAAAACATC
CACTATCCTC GCGTTGCGCA GGAAAATGCG ATCTCAGGTA CTGTGTTCGT ACAGTTCGTA
GTAGACTCAG AAGGTAACAT CAAAGATGTG AAAACTGTAG GTGCTGCGAA AGGTGGTGGT
CTGGAAGAAG AAGCAATCCG TGTGGTAAAA ATAATGCCTA AATGGAAAGC TGGTAAACAG
AACGGCCGTC AGGTATCTGT ACAGTTCAAC CTGCCTATCC GCTTTACGCT GCAAGAGTAG
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| Protein sequence | MDSAKVLKSD FLDILFENRN KEYGAYDLRR QYDKRVRNAV IGSAALMLVV IAGYAISNYI
NKLERENPDR KPVIEQIKME DVKIPDDPKT PPPPPPPPAP PPPVKPSVQF TPPVIKKDEE
VPEDEVPPKI KEIENKAIST KTVEGDPNGI DPGLLEDSKG TGVVEAPPPP PKEEIFTFVE
QPPTFPGGEE ALAKFLSKNI HYPRVAQENA ISGTVFVQFV VDSEGNIKDV KTVGAAKGGG
LEEEAIRVVK IMPKWKAGKQ NGRQVSVQFN LPIRFTLQE
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