7 homologs were found in PanDaTox collection
for query gene Shewmr7_1888 on replicon NC_008322
Organism: Shewanella sp. MR-7



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008322  Shewmr7_1888  hypothetical protein  100 
 
 		 245 aa  502  1e-141  Shewanella sp. MR-7  Bacteria  normal  1  normal  0.349997 
 
 
-
 
NC_008577  Shewana3_2211  NERD domain-containing protein  69.33 
 
 		 353 aa  289  3e-77  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008700  Sama_1610  hypothetical protein  29.09 
 
 		 387 aa  56.6  0.0000003  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00290154  normal  1 
 
 
-
 
NC_009952  Dshi_1708  hypothetical protein  34.12 
 
 		 259 aa  48.9  0.00007  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.352686  normal  0.0530118 
 
 
-
 
NC_008709  Ping_2522  DNA-binding NERD domain-containing protein  30 
 
 		 269 aa  45.8  0.0006  Psychromonas ingrahamii 37  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003910  CPS_2416  DNA-binding protein  27.78 
 
 		 267 aa  44.7  0.001  Colwellia psychrerythraea 34H  Bacteria  hitchhiker  0.00817944  n/a   
 
 
-
 
NC_008765  Ajs_4233  NERD domain-containing protein  32.93 
 
 		 207 aa  42.4  0.007  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>