Gene Shewmr7_1888 details

Gene Information

• Locus tag: Shewmr7_1888
• ID: 4256847
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella sp. MR-7
• Kingdom: Bacteria
• Replicon accession: NC_008322
• Strand: +
• Start bp: 2228189
• End bp: 2228926
• Gene Length: 738 bp
• Protein Length: 245 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 638122543
• Product: hypothetical protein
• Protein accession: YP_737934
• Protein GI: 114047384

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 8
• Fosmid unclonability p-value: 0.349997
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGAAGGGAC GCGTAAAAGA TAAGTGGGCT TATCCCGTGG TTTTTCGGCC GTTAATCTTG 
TGGATGAGCG CTCTGAGTAT CGGCTTATCT TGCTCAACGG CATGGGCGTT GGTGAAACAA 
GACTCTGAGG CCATCTGTAT TCTTATCCAA AGTGAGATGC AAGATTGGCA TCCCACTACG 
CCGCGCTACC AAGAGCTTAA AGCAAGATTT GACGAGCATT GCCAGCAGCC CGTCGCCAAC 
GGTGTTAAAT CCACGCTAAG GCCGTCTGCA ACGCCAACTA CGGTTCGACA CGACGTGCCT 
AAGCAGAAAC CCAATATAAT ACCTGCCGTA GTAACAGCGA AACCTACGTC CGCGGCAAGC 
ACCATTTCTC CCATCTCTTC AATGTTCGAG TCGCTGTCGA TTGTGTTGAT TATTCCAATC 
CTGTTGCTGG TGTTTGCGAT AGCTACCTTG TTATTTCGTC CGTCACTGAG ACAATACAGA 
GCTGAAAGAT TAGGTCAACA GGGGGAAAAG CGAGTCGCTA AGTTACTGAT ACAGGTTCTC 
AAAGATGAGG ACTACCGACT TTATCGCAAT TTAATTTTGC CCATGGATGA GCAAAATGGT 
GATACGCCTG CTTTGACGGA AGTTGATTTA GTCTTATTGA CCCATTTCGG CGTGTTCGTC 
CTTGAAGTTA AAAAATTACT CCGGCTGGAT ATTTGGCGGC GAGAAGCAGG CGCAGTGGAC 
ACAGAAAATC TTTACTAA 

 

Protein sequence

MKGRVKDKWA YPVVFRPLIL WMSALSIGLS CSTAWALVKQ DSEAICILIQ SEMQDWHPTT 
PRYQELKARF DEHCQQPVAN GVKSTLRPSA TPTTVRHDVP KQKPNIIPAV VTAKPTSAAS 
TISPISSMFE SLSIVLIIPI LLLVFAIATL LFRPSLRQYR AERLGQQGEK RVAKLLIQVL 
KDEDYRLYRN LILPMDEQNG DTPALTEVDL VLLTHFGVFV LEVKKLLRLD IWRREAGAVD 
TENLY