Gene Ping_2522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2522 
Symbol 
ID4623418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3080984 
End bp3081793 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content36% 
IMG OID639797648 
ProductDNA-binding NERD domain-containing protein 
Protein accessionYP_943842 
Protein GI119946162 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTATA ACAGTATGTT AAGTGGGATT GTTGAAGGCC TTCTGAGAAC AGCTTTGCAG 
TGGTGGTATT TGTTTCCAAT ATTAATATTG GGACTAATAG TTAAAACACC TTGGTTTAAA
GGCAAAGCAG GTGAGTTTTT AGTTAATTTT TTACTTAGTA AATTTATGGA TAAAAATAAA
TACCACTTAA TTAAAAATGT TACTTTGCCG ACTGATGATG GAACCACCCA GATTGATCAT
ATTGTGGTGT CACAGTTTGG TGTTTTTGTC ATAGAAACAA AAAATATGAA GGGCTGGATA
TTTGGCACCG CCAAACAAAA ACAGTGGACG CAAAAGATAT TCAGATACTC CGGCAAGTTT
CAAAACCCAT TACACCAGAA TTATAAACAT ACACAAACAT TAGCAGGCTG TTTAGATGTT
CCTTCCGAGT ATATTTATTC TGTTGTCGTA TTTGTTGGCG ATAGTACCTT TAAAACTAAA
ATGCCTGACA ATGTGACTTA TGCTCGAGGC TGTGTTGCGT ATATTAAAAG TAAAAAAGAA
CTTCATTTTA CAGAGGATAA AATTACCGAA ATCGTCACTG CAATTGAAGA GGGCCGATTA
TCACGAGGTT TGAAAACGAA TTTACAACAT ATAAAGCATG TGAAAGTAAT TGTAGAAGCT
AAGCAAGCGC CTAAAGTGAT TGAAGAAAAA ACATGCCCAA AATGTGGAAC CCTGATGATT
TTACGTGAAG CTAAAAAGGG TAAAAATGCG GGTAATCAGT TTTGGGGATG CAGTAATTTC
CCACAGTGTA GGACGGTAGT TGATCACTGA
 
Protein sequence
MDYNSMLSGI VEGLLRTALQ WWYLFPILIL GLIVKTPWFK GKAGEFLVNF LLSKFMDKNK 
YHLIKNVTLP TDDGTTQIDH IVVSQFGVFV IETKNMKGWI FGTAKQKQWT QKIFRYSGKF
QNPLHQNYKH TQTLAGCLDV PSEYIYSVVV FVGDSTFKTK MPDNVTYARG CVAYIKSKKE
LHFTEDKITE IVTAIEEGRL SRGLKTNLQH IKHVKVIVEA KQAPKVIEEK TCPKCGTLMI
LREAKKGKNA GNQFWGCSNF PQCRTVVDH