Gene CPS_2416 details

Gene Information

• Locus tag: CPS_2416
• ID: 3520843
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 2525968
• End bp: 2526771
• Gene Length: 804 bp
• Protein Length: 267 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 637284871
• Product: DNA-binding protein
• Protein accession: YP_269132
• Protein GI: 71280377

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00817944
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATTTAT CAATTTACTT CAACATGATA TTTAGTGCCG CTTGGTATTT AATACCGATC 
TTCATATTTG CTATCGTCAT AAAGTCTGCA TGGTTTAAAG GCATATTGGG CGAGTGGCAA 
GTAAACTTGC TCATCAAATT TTTCTTGAAC AAAAATGATT ACCACCTGAT TAAAAACGTA 
ACATTACCAA CATTCACTGA TGGTGAAGAG CAGGGGACAA CTCAGATCGA TCAAATTATC 
GTGTCAAAAT ATGGCATTTT TGTGGTTGAA ACCAAAAATA TGAAAGGTTG GATATTTGGT 
AGTGAAAATC AGAAGCAATG GACGCAACAA ATCTTTAAGC ACAAATCAAA GTTTCAGAAC 
CCACTTCATC AAAACTATAA GCATGTCAAA ACGTTAGAAG ATCTTCTCCT AACAGGGAGT 
AACGCAAAGA ATGATTGTAT ATTTTCAGTC ATTATCTTTA TTGGTGATAG TACTTTTAAA 
ACTAAAATGC CAGAAAACGT GAGGTTTGCG CGAGGTGGAA TTGAATTTAT TAAAAGTAAA 
GCAGATGTCA TTTTTGATCG CGATGAAGTA ATTAACAATA TCGATAAAAT CGAAAACGGT 
AGGTTGGAAC GTAGCTTCAA AACTAACCGA CAACACGTTA AACATGTAAA AGAAATAGTG 
CATAAAAAAA CTGATACAAA ATCGTGCTCT AGGTGCGGTT CTGAAATGGT ATTACGTAAA 
GCCAGCAAAG GTAAGAATGC AGGTAATGAG TTTTGGGGAT GCCGTTCGTT TCCTAGGTGC 
AGGAATGTAA TAACTGCTTG CTAA 

 

Protein sequence

MDLSIYFNMI FSAAWYLIPI FIFAIVIKSA WFKGILGEWQ VNLLIKFFLN KNDYHLIKNV 
TLPTFTDGEE QGTTQIDQII VSKYGIFVVE TKNMKGWIFG SENQKQWTQQ IFKHKSKFQN 
PLHQNYKHVK TLEDLLLTGS NAKNDCIFSV IIFIGDSTFK TKMPENVRFA RGGIEFIKSK 
ADVIFDRDEV INNIDKIENG RLERSFKTNR QHVKHVKEIV HKKTDTKSCS RCGSEMVLRK 
ASKGKNAGNE FWGCRSFPRC RNVITAC