14 homologs were found in PanDaTox collection
for query gene Shewana3_2001 on replicon NC_008577
Organism: Shewanella sp. ANA-3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008577  Shewana3_2001  hypothetical protein  100 
 
 
145 aa  293  5e-79  Shewanella sp. ANA-3  Bacteria  normal  normal  0.101784 
 
 
-
 
NC_009052  Sbal_2319  hypothetical protein  72.22 
 
 
145 aa  184  3e-46  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3316  hypothetical protein  59.03 
 
 
158 aa  181  2.0000000000000003e-45  Shewanella woodyi ATCC 51908  Bacteria  normal  0.879917  hitchhiker  0.000321545 
 
 
-
 
NC_009831  Ssed_1338  hypothetical protein  63.83 
 
 
158 aa  172  9.999999999999999e-43  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.00752637  normal  0.52847 
 
 
-
 
NC_008228  Patl_1076  hypothetical protein  47.66 
 
 
134 aa  128  3e-29  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_1214  hypothetical protein  57.48 
 
 
138 aa  117  4.9999999999999996e-26  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.000998214  n/a   
 
 
-
 
NC_009092  Shew_1233  hypothetical protein  53.68 
 
 
163 aa  110  9e-24  Shewanella loihica PV-4  Bacteria  normal  0.100338  normal 
 
 
-
 
NC_003910  CPS_3242  hypothetical protein  44.44 
 
 
136 aa  108  4.0000000000000004e-23  Colwellia psychrerythraea 34H  Bacteria  normal  0.069746  n/a   
 
 
-
 
NC_011138  MADE_02474  hypothetical protein  40.94 
 
 
137 aa  90.5  7e-18  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.438886  n/a   
 
 
-
 
NC_012912  Dd1591_3551  hypothetical protein  35.71 
 
 
135 aa  80.1  0.00000000000001  Dickeya zeae Ech1591  Bacteria  decreased coverage  0.0000705173  n/a   
 
 
-
 
NC_013421  Pecwa_0593  hypothetical protein  39.42 
 
 
135 aa  75.9  0.0000000000002  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I0449  hypothetical protein  34.81 
 
 
134 aa  70.9  0.000000000005  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_3181  hypothetical protein  33.08 
 
 
135 aa  63.5  0.0000000008  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_3796  hypothetical protein  33.33 
 
 
132 aa  60.5  0.000000007  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
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