Gene Sde_3796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3796 
Symbol 
ID3966870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4795953 
End bp4796351 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content40% 
IMG OID637922893 
Producthypothetical protein 
Protein accessionYP_529263 
Protein GI90023436 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAAA AAATAGATGC CTACACACAG CATGTAATGA GCCGTATTGA TCCTGATGTA 
TTTAAAACGC TTAACATAGT TCAGCTAGAA GCAATACGTA CTGCCATTAG TGCCAACGCG
CCATTTCGCC AACACTCTAT TGACCTGCGC GGCACCATTC CACTGTACTT CAGTAAACTC
TATTTTGTTT TTCTAATAGG TAAAGATCGC CGCTCCGACA CACGCAATAA AGAAAATATG
CGCATAAAAG CTTCTAAGGG CATTAGTTTT GTAATGTTTC TATACACACT GCTCGCCGTA
CTCACCCCAA TTATTTTGAT TATTCTGTAT GGGTTAAAAA CCTTGGCGGG CATTGATATA
TTCCCCGATT CGCACTTAGA AGATTTATTA CCGAAATAA
 
Protein sequence
MSKKIDAYTQ HVMSRIDPDV FKTLNIVQLE AIRTAISANA PFRQHSIDLR GTIPLYFSKL 
YFVFLIGKDR RSDTRNKENM RIKASKGISF VMFLYTLLAV LTPIILIILY GLKTLAGIDI
FPDSHLEDLL PK