6 homologs were found in PanDaTox collection
for query gene Shew_0252 on replicon NC_009092
Organism: Shewanella loihica PV-4



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009092  Shew_0252  hypothetical protein  100 
 
 		 330 aa  664    Shewanella loihica PV-4  Bacteria  normal  1  normal  0.493242 
 
 
-
 
NC_013456  VEA_003313  permease  26.93 
 
 		 330 aa  127  2.0000000000000002e-28  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_009092  Shew_0682  major facilitator superfamily permease  28.91 
 
 		 367 aa  119  7e-26  Shewanella loihica PV-4  Bacteria  normal  1  normal  0.215673 
 
 
-
 
NC_008700  Sama_1001  major facilitator superfamily permease  28.4 
 
 		 358 aa  106  5e-22  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009621  Smed_5667  putative transmembrane protein  21.79 
 
 		 342 aa  51.6  0.00002  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012850  Rleg_2396  putative transmembrane protein  22.39 
 
 		 342 aa  47.8  0.0003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.296923  decreased coverage  0.00231835 
 
 
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