| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1001 |
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| Symbol | |
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| ID | 4603253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1213024 |
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| End bp | 1214100 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639780340 |
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| Product | major facilitator superfamily permease |
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| Protein accession | YP_926878 |
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| Protein GI | 119774138 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCCTG AACGCACCGA GGGACTTCGC CTTTGGTATT TCAAAGGCTT TTCCAGCAGG
GCTAACCCAA TCCTGAGAAT CGCCGTAGCT GCGCTGGTAC CGCTGTTTGT ACTCCATTAT
CTGGAAAACC CGTTGCCCAT GTTGGTGTCG GTATTTGCGG TGATCATGCT CACCCTGATG
CCGGGACGCC CCTCACTGCA GGTTCTGTCG AAACTCAGCA TGGTAGTGGT GGCTGCCGCC
ATGGTGCAGC ATGCTGCCGG TATTCTGCTG TCGGGAACGG GCACCGGCTC CTGGATGTTT
TTATTTGCGG TGCTCTTCTA CAGCCTGTCG CGAATCCACC TGAACCCCAA AGATATCGTC
GGGACTATGA TGATGATTCT TGGGATCATG GTGACTATAT TGCACTGGCA ATTTGCCACG
ACAGTATCTG ACTTACCGCT GGTACTGGCG GCCAACTTCG TGGGCGCCAT TGTGATGGTG
TATCTGGTAT TTTGGCTGTT TCCAGGGGAA GAGCTGGGCG CCGAGGCTGA CACGGCCTGG
GAAGTAACCC CCAGTCACTG GCTTAAAATT GTTGTTAAGT CACTATTTTT ATTACTGGTA
ATATTTTTGC TGATTGATTC GGATAACAGT CAGAGCCTGC TTATCGCTAT TACGCTTGCC
AATCTCATCA AAGATCCCAA TCCCATGGCC GGAACCCACA ATGGACGGCA AAGGCTGTGG
ACGACCGCGG TGGGAGTGCT GCTGACATTA CCCTTATTGT TGGCATTTTG GCTGGATATG
CACTGGTGGC TGTTGATGTT GTTTGCCATT GCCCTGGCCT TGTGGGGCAG TGCAACGGCG
CTGGAACACA GGGTATCCAT GGCAGAGTAT CAACTGCTGA TGAGCAGCTT TGTCATGCTG
GTTTATCAGG TCATCAGCCA TGATGGCACC AGCTCTCTCA CCTCGTCCCT CACCCGATTT
GGGGCCGTGG TACTGGCTGT TTTACTGGGG GTGATGATGC TGGGAATGCT GTCTGAACTT
GGGGTGACTC GCACCGGTAG CCGTGTGGCC AAGCCCAGTA ACGTGGGCCA AGACTGA
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| Protein sequence | MSPERTEGLR LWYFKGFSSR ANPILRIAVA ALVPLFVLHY LENPLPMLVS VFAVIMLTLM
PGRPSLQVLS KLSMVVVAAA MVQHAAGILL SGTGTGSWMF LFAVLFYSLS RIHLNPKDIV
GTMMMILGIM VTILHWQFAT TVSDLPLVLA ANFVGAIVMV YLVFWLFPGE ELGAEADTAW
EVTPSHWLKI VVKSLFLLLV IFLLIDSDNS QSLLIAITLA NLIKDPNPMA GTHNGRQRLW
TTAVGVLLTL PLLLAFWLDM HWWLLMLFAI ALALWGSATA LEHRVSMAEY QLLMSSFVML
VYQVISHDGT SSLTSSLTRF GAVVLAVLLG VMMLGMLSEL GVTRTGSRVA KPSNVGQD
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