| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003313 |
|---|
| Symbol | |
|---|
| ID | 8557046 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 1871258 |
|---|
| End bp | 1872250 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 646406408 |
|---|
| Product | permease |
|---|
| Protein accession | YP_003285938 |
|---|
| Protein GI | 262394084 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCATA GTTCAGCAAA CCCAATCATT AGATTGGTTT TCACTCCGAT TCTTTTACTG
TTTTACTTAC AGTATTCAGG TGCGCCTACT CCCTTTATCG CGCCAATATT CGTTGTGATT
TTTCTAACAC TGATGCCATC TAAACCCCCG TTCAACATGA TGTTGAAATT GCTGGTAATA
CTCTCACTAC TCAGCTTTGG CATCGTAACT TTAGCAGGAG CGCTCATGAG CTCCCCTAGT
GGCTTCTTAC TGTTTACTTG GTCACTTCTC TGTTGGAGTT ATTACCGAAG TCATCGCGAT
CCCAAAGACA TCGTTTCGAC ACTCACTTTG ATTGTTGTAT TGATTATCGT GGTCACAAGC
CAACAAATGG GGTTGTCGCT TGAGGGGTTG CCATGGGTCT TATTTACTAA CTTCATTGTT
GCGTTGGTTG CCACATATAT TAGCTTTTGG TTATTCCCTG GGGACGAAAA AGATATACAA
CCAGACCAAA CCACTCTTGA TGGTGCAGAC GAACATATCG GGCTTATCGT CTTTAAAGCA
ACCGCATTGT GTGTTGTTTT GTACGCGCTA ATATCATCTG GAAGCTCTCA AACGCTATTG
ATCGCAATAA CATTTGGCAG CATGATTAAG CACCCAATTA ATCAAGACAG TCATTCCTTT
GGGCGGTATC GAATTATCAC TACAAGCCTA GGGATCTTGT TTACTATTCC ATGCATGCTT
GCAGTAGCCA CAGGTGCACC TACTTACGTT GTACTTGGCG TTACCATCTT TTGTGGCCTG
CAACTAGCGT GTTTTGCAAT ACGTCGACAG ACACACTTAA CCATCTATCA ATTGCTTTTT
ACTAACTTCA CTGTGCTGAC TTACCAGATT ATTAACAATA CGGGCATCGA ATCATTTTCT
GCTCAAATGA CTCGATTCGT CTCTATTTCT ATCGCTATAG TTCTAGGGGT ACTGGTTCTC
AATTTATTTA GATCAGAGCA AGAGGTGAAA TAA
|
|---|
| Protein sequence | MFHSSANPII RLVFTPILLL FYLQYSGAPT PFIAPIFVVI FLTLMPSKPP FNMMLKLLVI
LSLLSFGIVT LAGALMSSPS GFLLFTWSLL CWSYYRSHRD PKDIVSTLTL IVVLIIVVTS
QQMGLSLEGL PWVLFTNFIV ALVATYISFW LFPGDEKDIQ PDQTTLDGAD EHIGLIVFKA
TALCVVLYAL ISSGSSQTLL IAITFGSMIK HPINQDSHSF GRYRIITTSL GILFTIPCML
AVATGAPTYV VLGVTIFCGL QLACFAIRRQ THLTIYQLLF TNFTVLTYQI INNTGIESFS
AQMTRFVSIS IAIVLGVLVL NLFRSEQEVK
|
|---|
| |