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4 homologs were found in PanDaTox collection
for query gene
Shew_0682
on replicon NC_009092
Organism:
Shewanella loihica PV-4
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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score
E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009092
Shew_0682
major facilitator superfamily permease
100
367 aa
730
Shewanella loihica PV-4
Bacteria
normal
1
normal
0.215673
-
NC_013456
VEA_003313
permease
58.9
330 aa
374
1e-102
Vibrio sp. Ex25
Bacteria
normal
1
n/a
-
NC_008700
Sama_1001
major facilitator superfamily permease
35.8
358 aa
171
3e-41
Shewanella amazonensis SB2B
Bacteria
normal
1
normal
1
-
NC_009092
Shew_0252
hypothetical protein
28.91
330 aa
129
1.0000000000000001e-28
Shewanella loihica PV-4
Bacteria
normal
1
normal
0.493242
-
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