| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0252 |
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| Symbol | |
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| ID | 4923533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 270902 |
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| End bp | 271894 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640161776 |
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| Product | hypothetical protein |
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| Protein accession | YP_001092383 |
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| Protein GI | 127511186 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.493242 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCATA GTGCCGCTAA CCCAATTATA AGAGTTGCGG TATTCCCTGT CCTTTTGCTG
TTTTGGCAAT ATGTATATGG GACGGATTTG CCTTTACTCG CTCCAGCGAT GTGTGCGGTT
TTTCTCACTA CAACTCATGA ACCACCGCCT GTAATTATGG TGTTTGTTAT GGGGGGAATT
TTATTCATTA CTGCTTGGTT TCAGGCACTA ATGAGTGAAC TATTGATTGA TTACGTACAT
GTTTACTATC TGTTCTTGTT TGGAATTTTT TACTGGTGCA TGGAGCGTAC CAAGAAAAAT
TCGCAAGATG TATTTGCTAT ATTGCTGATT GTCTCAACCG CAATGATTGC TGTTTTTACG
CAGCAAAAAG GGATTAGCGT TGAGCAAATC CCCATGGCTC TGCTAAAAAA TATTTTTATC
GCTGGCTTCA CCGCCTATTT GGCCTACCTA CTATTTCCAC GAGGTGAGCC ACTCGCGATA
AACATGCCAC CTGTCAATTC GACAACGAAA TATTTGCTTG ATTGGCAAAC CTTGCTCAAA
GCGGTCATTG TCATGACCAT GATGGTGTGT ACGATACAAT TGGACTTAGA GCAAAGTACG
ATTATTACCA TCATCGTCGC GTTAATGATT AAAGATCCTG ATCCTAGTAT TGGTAAAGAT
TATGGTTTAA GAAGGCTGCT TACAACATAC GCGAGCGTGC TGTATGCCAT TCCTCCCCTA
ATCATGAGTT TGCTGCAAGT CAATTTGGTA GGAACTGTGG GTGTTGCTGT CGTCAGTGCT
TTATTTATGG GGATTCATGC CGTTACAAAG AAAGCTAGCT ATAACTCAAT TCAACTGATG
TATTCAAGTT ATGTGGTTTT AGTATTCTAT GGGATTACTT CAACAAGTAT CAGTGCGATT
TCAGATGACC TCGTGCGTTT TACTTCGGTT TTTGCCGCTG TATTAATCGG TATCATGAGT
TTGATTATCT TATACCCTAG AACTAGAACT TAA
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| Protein sequence | MYHSAANPII RVAVFPVLLL FWQYVYGTDL PLLAPAMCAV FLTTTHEPPP VIMVFVMGGI
LFITAWFQAL MSELLIDYVH VYYLFLFGIF YWCMERTKKN SQDVFAILLI VSTAMIAVFT
QQKGISVEQI PMALLKNIFI AGFTAYLAYL LFPRGEPLAI NMPPVNSTTK YLLDWQTLLK
AVIVMTMMVC TIQLDLEQST IITIIVALMI KDPDPSIGKD YGLRRLLTTY ASVLYAIPPL
IMSLLQVNLV GTVGVAVVSA LFMGIHAVTK KASYNSIQLM YSSYVVLVFY GITSTSISAI
SDDLVRFTSV FAAVLIGIMS LIILYPRTRT
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