8 homologs were found in PanDaTox collection
for query gene Shel_23790 on replicon NC_013165
Organism: Slackia heliotrinireducens DSM 20476



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013165  Shel_23790  hypothetical protein  100 
 
 
453 aa  942    Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_0215  polysaccharide pyruvyl transferase  22.49 
 
 
366 aa  54.7  0.000004  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_2702  polysaccharide pyruvyl transferase  19.51 
 
 
745 aa  48.9  0.0002  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.0000746297  n/a   
 
 
-
 
NC_010718  Nther_2379  polysaccharide pyruvyl transferase  21.29 
 
 
400 aa  48.9  0.0002  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.0000108064  normal 
 
 
-
 
NC_011898  Ccel_2883  polysaccharide pyruvyl transferase  21.68 
 
 
745 aa  48.5  0.0002  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2202  polysaccharide pyruvyl transferase CsaB  25 
 
 
332 aa  46.2  0.001  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_2981  hypothetical protein  23.12 
 
 
387 aa  45.1  0.002  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_0102  polysaccharide pyruvyl transferase CsaB  21.68 
 
 
367 aa  43.1  0.009  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
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