| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2702 |
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| Symbol | |
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| ID | 4810696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 3187059 |
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| End bp | 3189296 |
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| Gene Length | 2238 bp |
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| Protein Length | 745 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640108121 |
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| Product | polysaccharide pyruvyl transferase |
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| Protein accession | YP_001039094 |
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| Protein GI | 125975184 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[S] Function unknown |
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| COG ID | [COG0438] Glycosyltransferase
[COG2327] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03609] polysaccharide pyruvyl transferase CsaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000746297 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTTC TTCATTTAAT AGGCGGAGGA GACGTTGGCG GAGCAAAAAG CCATGTTCTC
TCTCTGGTCA GGGAACTTGG CAAACATATA AATGTAAAAC TTATAAGTTT CAGGACAGGT
GCTTTTGCCG ATGACGCCCG TGCAATGGGT ATAAACGTGG AAGTTGTAAA TACAGGCACC
ATTTTTTCTG ATGTGCGTAA AGTTTTAAGA ATTGTAAGGG AGGAAGGGTA CGAGCTTATT
CATTCCCATG GTGCAAAAGC CAACATGATT GCCGTTTTGG TAAAAAGGCT TACCGGGCTT
CCCGTGGTTA CTACAGTTCA CAGCGACTAC AGGCTTGATT ATTTGCAAAA TATCTTTAAA
ATGTTCTCCT TCGGCCTTAT AAACATGGTT TCATTGAGAT TCATTGACTT TCATATAGCC
GTTTCCAAAA ACTTCAAGAC AATGCTTATT GAAAGAAAGT TCAGTCCTCA AAACATATTT
ACCGTTTACA ATGGCATTAA TTTCAACCAG GAAATTAATC CTTTGCCAAA AGAGGAGTTT
TTAAAAAAAT ACAACCTGAA ATTTGGGGAA AACGATGTCA TAATCGGAAT ACTGGCCCGT
CTTGACCCTG TAAAAGGCCT GGATACATTC CTTAAGGCTG CAAATGCCGT CATTAAAACC
AATCCGACGG CAAGGTTTTT GATAGCAGGA GACGGACCCG AGCGAAAATC CCTCGAAAAA
AAGGCCGCAT CCTACGGTCT TCAGAACAAC GTTTTCTTTT TAGGTTTCGT AAACAAACCT
TACGATTTTT TAAACTCTAT AGACATAAAC ACTCTTACTT CGCTGAGCGA AAGTTTTCCC
TATGCAATCC TTGAAGGCTC TCTGCTGAAA AAAGCCACTA TAAGCAGCAA TGTGGGAGGC
ATTTCAGACC TTATTGAAAG CGGAATAAAT GGTTTTCTCT TTGAGCCGGG AGATTACGAA
ACTTTGGCCG GCCACATATT GACCCTCATA AATGACCCCG CACTGAGAAA AAAAATGGGG
GAAAAAATTC ATGAAAAGGC CAGTTCGCAC TTTTCTTTGG ACAATATGTG CAAAACACAG
CTTGACATAT ATGAAACAAT TCTTCTTCGG AGTTTTAGAA ACAGCAGGTC CAAATATCGC
TACGATGCAA TTATCTCAGG TTATTACGGC TTTAAAAACA TCGGAGATGA CGCCATGCTT
ATGGCTATAA TTGACAATCT TCGCATGTAT CGAAGAGATT TAAGAATTTT GGTCCTGTCC
AGAAATCCCT TGGAAACAGG ACTTGTATAT AATGTTGATT CAATAAACAG GTTCAACCTC
CTTAAAATCC TTCTCATCAT GAGGAATTCA AAACTTTTTA TAAACGGAGG AGGAAGCCTG
ATTCAGGACA ACACCAGTAC CCGTTCCCTT ATATATTATC TCGGAATGAT CTGGCTTGCA
AAAAAAATGG GTATGAAGGT GATGATTTAC GCCAACGGCA TAGGGCCTTT GAACAAGGAA
AAAAACCGGA AGCTTACAAA GAAAATTGTA AACCGGGTGG ATGTCATCAC TTTGAGAGAA
AAGTTGTCCT ATGAAGAATT AAACAATCTT AAAATTCAAA GTCCCAGGAT TAAGGTAACT
GCCGACCCGG CTTTTACCAT AATACCCGAA AAAATCGAGC GTGTAAATCA GCTTCTCATA
GATGAGGGAA TTGACCCGAA CGAACAACTT GTCGGCATAT CCGTGAGAAA ATGGGGCGAA
CATGAAAAAT ATGAGACCAC AATTGCGGAA CTTGCGGATT ATATAGTCGA AAAATACGGT
ATGAAACCCC TTTTTATAGC AATGCACTAT CCGGAAGACC TTGCAATAAT TCAAAATATA
ACTTCGAAAA TGAAAAACAA AAGCTTTGTA ATAACCAATA AACCTACTGT TTCAGAAATG
CTTGGAATAA TCGGCAAAAC TCAAATGCTT ATCGGAATGC GCCTTCATGC TCTTATTTTT
GCCGCAAGCC TCGGAATACC CGTGGTGGGA ATGGTGTACG AACCCAAGGT TGAAGGTTTT
ATGCAGTATA TCAACCAGGC ATCGGCGGGA CATGTAAACT CCCTGGAACT GGAACATATG
AAAAAAATAG TGGATGAAAC CTGGGAAAAC AGGGAAGCCA TAAAAAAAGA GCTGGAAAAA
AACACTGCGG TTCTTAAAGA CAAGGCTCTT GAGAACGCTA AAATTGCAAT TGAAATGATT
GATGAAAAAC CTCTTTAA
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| Protein sequence | MKVLHLIGGG DVGGAKSHVL SLVRELGKHI NVKLISFRTG AFADDARAMG INVEVVNTGT
IFSDVRKVLR IVREEGYELI HSHGAKANMI AVLVKRLTGL PVVTTVHSDY RLDYLQNIFK
MFSFGLINMV SLRFIDFHIA VSKNFKTMLI ERKFSPQNIF TVYNGINFNQ EINPLPKEEF
LKKYNLKFGE NDVIIGILAR LDPVKGLDTF LKAANAVIKT NPTARFLIAG DGPERKSLEK
KAASYGLQNN VFFLGFVNKP YDFLNSIDIN TLTSLSESFP YAILEGSLLK KATISSNVGG
ISDLIESGIN GFLFEPGDYE TLAGHILTLI NDPALRKKMG EKIHEKASSH FSLDNMCKTQ
LDIYETILLR SFRNSRSKYR YDAIISGYYG FKNIGDDAML MAIIDNLRMY RRDLRILVLS
RNPLETGLVY NVDSINRFNL LKILLIMRNS KLFINGGGSL IQDNTSTRSL IYYLGMIWLA
KKMGMKVMIY ANGIGPLNKE KNRKLTKKIV NRVDVITLRE KLSYEELNNL KIQSPRIKVT
ADPAFTIIPE KIERVNQLLI DEGIDPNEQL VGISVRKWGE HEKYETTIAE LADYIVEKYG
MKPLFIAMHY PEDLAIIQNI TSKMKNKSFV ITNKPTVSEM LGIIGKTQML IGMRLHALIF
AASLGIPVVG MVYEPKVEGF MQYINQASAG HVNSLELEHM KKIVDETWEN REAIKKELEK
NTAVLKDKAL ENAKIAIEMI DEKPL
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