| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2981 |
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| Symbol | |
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| ID | 5610536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3609753 |
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| End bp | 3610916 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640933921 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474716 |
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| Protein GI | 157376116 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2327] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAATAG AGATAAAAGG TGTTCAGTTT GTCAATAAAG GCGCTGAACT CATGTTGTAT
GCCGTGTTGC AGCAAGTCGA GAAGCTCTGG CCTGATGCCG AGATAGCGCT AAGAGCCTGT
CCTAATTCAC CTTATTTGAA GCGTGCTCGC CTGGGAGCAT GGCAAAAGGT CAGTCTGCGT
AAACATATTA TCGATTTGAA TAAGTTTACT TACTCACTGC CGACTAAGGT CAATGCCTCC
CTCAAACGTT TGGGTATTGT CACCGAAGCC GACATCGACC TTGTACTGGA TGCCTCAGGA
TTTGCCTATG GTGATCAATG GCCATTGAGA CAGCTGACCC ATATCAGCCA TGAAGTTTCG
CGGTATCATG CTAATAAAAA GCCCTATATA TTTCTGCCTC AGGCATTTGG CCCTTTTTCA
AATCAGGCGT TGGAATCGTC TATCAGATCC CACTGGGGTA AAGCTGCGCT TATTTTTGCC
CGAGATAAGG TGTCACACTC TCATCTCGTC AGGTGTCTAG GGGAAGATAA CCCGTCGCAA
GAATCACTAC ATCTTATGCC TGATTTTACT AACCTGGTTA AAGGTAATCG GGTTGGGTTA
GACAATGCTG ACAGAACGGT ATTGATCATA CCCAATGGCA AGATGGTCAG TCGTCGAAAT
GGCAGAAAGT CCTGGATTGA GAACTACACT GCTTTAATGT CAAGAATGTG TGTCGAATCA
CATGAATTGG GTTTCACCCC TGTGCTGCTT AACCACGACG GCGCAAAGGA TGCTAAGTTA
TGTGAGCAGA TCATAGCGGG AAGTAAACTT GAACTGCAGA CCCTCACTTT AGATGATCCC
CTGGATGTAA AAGGTGTGAT CGGTGAAGTG GCCGCCGTAA TCAGCTCACG TTTTCATGGT
TGTGTGAGCG CCTTGAGTCA GGGCGTTCCC TGTATCGGCA CCAGCTGGAG CCATAAGTAT
GAGGAGCTTT TTGCCGATTA TGGACAGCAG CAGATGTTGA TCTCAACTCC CGAGGATGAG
GGGGTAAGTG CTAACCTTCA ACATCTTCTT TGTGATAGTT ATGCTAAAGA GTGTCGGGAA
AATCCATTGA TTGATTCACA AAAAGCCGAG ACTAAAAAAA TGTGGTCTCT TGTTTTTGAC
AAGGTTGCTA AATACCATGT CTGA
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| Protein sequence | MIIEIKGVQF VNKGAELMLY AVLQQVEKLW PDAEIALRAC PNSPYLKRAR LGAWQKVSLR
KHIIDLNKFT YSLPTKVNAS LKRLGIVTEA DIDLVLDASG FAYGDQWPLR QLTHISHEVS
RYHANKKPYI FLPQAFGPFS NQALESSIRS HWGKAALIFA RDKVSHSHLV RCLGEDNPSQ
ESLHLMPDFT NLVKGNRVGL DNADRTVLII PNGKMVSRRN GRKSWIENYT ALMSRMCVES
HELGFTPVLL NHDGAKDAKL CEQIIAGSKL ELQTLTLDDP LDVKGVIGEV AAVISSRFHG
CVSALSQGVP CIGTSWSHKY EELFADYGQQ QMLISTPEDE GVSANLQHLL CDSYAKECRE
NPLIDSQKAE TKKMWSLVFD KVAKYHV
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