Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_23790 |
Symbol | |
ID | 8396268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 2635506 |
End bp | 2636867 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644987126 |
Product | hypothetical protein |
Protein accession | YP_003144737 |
Protein GI | 257065065 |
COG category | [S] Function unknown |
COG ID | [COG2327] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCGTA TTCTGGCTTT GATTGTCCGC TTTTGCGCGT TCCTCGGTCG GTTCACAAAC CGCGTCTCAT ATCGGCCCCT CGACTCGCAC GGCGCAGACG ACCCGCTGAA AATCCTGCTC GTAGGGTACA ACGGGGCCCG CAACACCGGA TCCGACGTCC GTGTCGCGTC GCTCATTACC CAGCTCAACG ACGAATTCGG CAGCGACCGC ATACGCATGT CCCTCATGTC GCTGGACCCG TCCAGCACCG AACCCTACCT CGCGCCCAAC GTGGACGCCA TCCCCTTTGA CACCATGTTC TTCCTCCCGC TGCTGAAAGC CTGCAGCACC CACGAAGTCA TCATCTTGTG CGAAGGATCC ATGCTCAAAA GCAAGTTTGC CAACGGCCTA ACCCTGTTCA TGTGCGAGGC GGCCGGCATC GCAAAAGCCC AGCACAAGCC CTGCATCGCC TATGGAGGCG AAGCAGGCGA CATGGATGCC TTCGTCAGCA ACACCGCCCG CAAGCTCTGC ACCGACGCCA AGTTCATCGC CCGCACCGAA GGTTCCCGCG AAGCCATGCG GCAGCTGGGG TTCGAAGCCG AGCTGGGCAC GGACACCGCA TGGACCTTCG ACGGTGCCCA CGCCTCCGAA AAGGCCCGTG ACCTGCTTGT ATCCCAGGGT TGGAACGGCA CCCAGCCCCT GCTGGGGATC GCGGTCATCA ACCCCTTCTG CTGGCCGGCC AAGCCTTCGC TGGGCAGACT CGCTAAATCG GCCCTGACAG GCACCTGGGA GCAGCACTAC CAGAAATGGT ATTTCTTCAG CTGGTCGGAA GAGCGCGCCC GCGCCTTCGA AACGTATTTG CAGAAAATGG CCCAGGCCGT CGAAGACGCC TGTGCGAAAT ACGGGTTCTT CCCCGTCATC ATCGGCATGG AAAAGCTCGA CCTGGAGGCC TGCACCAGGC TCGGCGCCAT GACCGAACGC CCCCATGCCA GCATCTTGTC CAATAACCAG GACGGCTACG TCATCTCCGA GGTCATCGGA ATGCTGAGCC GGCTGGCCAC CTCGCGTTAC CACGCGGCTG TGCTGGCCAT CAAGCAGGGC ATATGCCCGA TCGGCGTGTC CATGGATGAG CGTCTGCAGA ACCTGTTCGA GGATGCAGGA ATCAGCAAAA CCCTGCTCCT GAGCGTAAAC GACCCAGCCC TGGAGACGTC CATGGCGAAA GCCCTGGACG AGGTTTCGAA CCTGAGCCAG GAGAAGCATG CGGAACTGAG CCGCTATGTC GACGACCGCC GTGCGTTGTG CCGTCGCATG GCCGTTGACA CCAAACGCTA TCTTGCGGAG TTCAGCCCGC TTGCCCACGA CCTGCACCTG AAGGAGGCCT AG
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Protein sequence | MDRILALIVR FCAFLGRFTN RVSYRPLDSH GADDPLKILL VGYNGARNTG SDVRVASLIT QLNDEFGSDR IRMSLMSLDP SSTEPYLAPN VDAIPFDTMF FLPLLKACST HEVIILCEGS MLKSKFANGL TLFMCEAAGI AKAQHKPCIA YGGEAGDMDA FVSNTARKLC TDAKFIARTE GSREAMRQLG FEAELGTDTA WTFDGAHASE KARDLLVSQG WNGTQPLLGI AVINPFCWPA KPSLGRLAKS ALTGTWEQHY QKWYFFSWSE ERARAFETYL QKMAQAVEDA CAKYGFFPVI IGMEKLDLEA CTRLGAMTER PHASILSNNQ DGYVISEVIG MLSRLATSRY HAAVLAIKQG ICPIGVSMDE RLQNLFEDAG ISKTLLLSVN DPALETSMAK ALDEVSNLSQ EKHAELSRYV DDRRALCRRM AVDTKRYLAE FSPLAHDLHL KEA
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