Gene Shel_23790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_23790 
Symbol 
ID8396268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2635506 
End bp2636867 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content61% 
IMG OID644987126 
Producthypothetical protein 
Protein accessionYP_003144737 
Protein GI257065065 
COG category[S] Function unknown 
COG ID[COG2327] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGTA TTCTGGCTTT GATTGTCCGC TTTTGCGCGT TCCTCGGTCG GTTCACAAAC 
CGCGTCTCAT ATCGGCCCCT CGACTCGCAC GGCGCAGACG ACCCGCTGAA AATCCTGCTC
GTAGGGTACA ACGGGGCCCG CAACACCGGA TCCGACGTCC GTGTCGCGTC GCTCATTACC
CAGCTCAACG ACGAATTCGG CAGCGACCGC ATACGCATGT CCCTCATGTC GCTGGACCCG
TCCAGCACCG AACCCTACCT CGCGCCCAAC GTGGACGCCA TCCCCTTTGA CACCATGTTC
TTCCTCCCGC TGCTGAAAGC CTGCAGCACC CACGAAGTCA TCATCTTGTG CGAAGGATCC
ATGCTCAAAA GCAAGTTTGC CAACGGCCTA ACCCTGTTCA TGTGCGAGGC GGCCGGCATC
GCAAAAGCCC AGCACAAGCC CTGCATCGCC TATGGAGGCG AAGCAGGCGA CATGGATGCC
TTCGTCAGCA ACACCGCCCG CAAGCTCTGC ACCGACGCCA AGTTCATCGC CCGCACCGAA
GGTTCCCGCG AAGCCATGCG GCAGCTGGGG TTCGAAGCCG AGCTGGGCAC GGACACCGCA
TGGACCTTCG ACGGTGCCCA CGCCTCCGAA AAGGCCCGTG ACCTGCTTGT ATCCCAGGGT
TGGAACGGCA CCCAGCCCCT GCTGGGGATC GCGGTCATCA ACCCCTTCTG CTGGCCGGCC
AAGCCTTCGC TGGGCAGACT CGCTAAATCG GCCCTGACAG GCACCTGGGA GCAGCACTAC
CAGAAATGGT ATTTCTTCAG CTGGTCGGAA GAGCGCGCCC GCGCCTTCGA AACGTATTTG
CAGAAAATGG CCCAGGCCGT CGAAGACGCC TGTGCGAAAT ACGGGTTCTT CCCCGTCATC
ATCGGCATGG AAAAGCTCGA CCTGGAGGCC TGCACCAGGC TCGGCGCCAT GACCGAACGC
CCCCATGCCA GCATCTTGTC CAATAACCAG GACGGCTACG TCATCTCCGA GGTCATCGGA
ATGCTGAGCC GGCTGGCCAC CTCGCGTTAC CACGCGGCTG TGCTGGCCAT CAAGCAGGGC
ATATGCCCGA TCGGCGTGTC CATGGATGAG CGTCTGCAGA ACCTGTTCGA GGATGCAGGA
ATCAGCAAAA CCCTGCTCCT GAGCGTAAAC GACCCAGCCC TGGAGACGTC CATGGCGAAA
GCCCTGGACG AGGTTTCGAA CCTGAGCCAG GAGAAGCATG CGGAACTGAG CCGCTATGTC
GACGACCGCC GTGCGTTGTG CCGTCGCATG GCCGTTGACA CCAAACGCTA TCTTGCGGAG
TTCAGCCCGC TTGCCCACGA CCTGCACCTG AAGGAGGCCT AG
 
Protein sequence
MDRILALIVR FCAFLGRFTN RVSYRPLDSH GADDPLKILL VGYNGARNTG SDVRVASLIT 
QLNDEFGSDR IRMSLMSLDP SSTEPYLAPN VDAIPFDTMF FLPLLKACST HEVIILCEGS
MLKSKFANGL TLFMCEAAGI AKAQHKPCIA YGGEAGDMDA FVSNTARKLC TDAKFIARTE
GSREAMRQLG FEAELGTDTA WTFDGAHASE KARDLLVSQG WNGTQPLLGI AVINPFCWPA
KPSLGRLAKS ALTGTWEQHY QKWYFFSWSE ERARAFETYL QKMAQAVEDA CAKYGFFPVI
IGMEKLDLEA CTRLGAMTER PHASILSNNQ DGYVISEVIG MLSRLATSRY HAAVLAIKQG
ICPIGVSMDE RLQNLFEDAG ISKTLLLSVN DPALETSMAK ALDEVSNLSQ EKHAELSRYV
DDRRALCRRM AVDTKRYLAE FSPLAHDLHL KEA