10 homologs were found in PanDaTox collection
for query gene Sde_3608 on replicon NC_007912
Organism: Saccharophagus degradans 2-40



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007912  Sde_3608  hypothetical protein  100 
 
 
417 aa  846    Saccharophagus degradans 2-40  Bacteria  normal  0.789533  decreased coverage  0.0000392195 
 
 
-
 
NC_008228  Patl_3775  hypothetical protein  42.79 
 
 
436 aa  337  2.9999999999999997e-91  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01805  hypothetical protein  40.76 
 
 
436 aa  324  2e-87  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_4459  hypothetical protein  40.26 
 
 
454 aa  282  1e-74  Delftia acidovorans SPH-1  Bacteria  normal  0.448682  normal  0.0102439 
 
 
-
 
NC_010717  PXO_04087  hypothetical protein  40.11 
 
 
422 aa  269  8e-71  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_0683  hypothetical protein  29.18 
 
 
463 aa  179  1e-43  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_3333  hypothetical protein  27.02 
 
 
449 aa  159  8e-38  Flavobacterium johnsoniae UW101  Bacteria  normal  0.437943  n/a   
 
 
-
 
NC_013132  Cpin_5323  hypothetical protein  23.62 
 
 
482 aa  98.2  3e-19  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.17294 
 
 
-
 
NC_009485  BBta_3359  hypothetical protein  20.46 
 
 
491 aa  84.7  0.000000000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.796012 
 
 
-
 
NC_011071  Smal_2049  multi-copper enzyme maturase ABC-type transport system permease component-like protein  25.22 
 
 
452 aa  79.3  0.0000000000001  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
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