11 homologs were found in PanDaTox collection
for query gene SO_4636 on replicon NC_004347
Organism: Shewanella oneidensis MR-1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_004347  SO_4636  putative lipoprotein  100 
 
 		 425 aa  864    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_3012  lipoprotein  38.92 
 
 		 437 aa  292  7e-78  Shewanella woodyi ATCC 51908  Bacteria  normal  0.214836  normal  0.364321 
 
 
-
 
NC_009901  Spea_0336  hypothetical protein  35.73 
 
 		 404 aa  189  8e-47  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0182266  n/a   
 
 
-
 
NC_013457  VEA_001592  putative lipoprotein  32.11 
 
 		 399 aa  144  3e-33  Vibrio sp. Ex25  Bacteria  unclonable  0.00000000686161  n/a   
 
 
-
 
NC_009784  VIBHAR_05569  hypothetical protein  31.08 
 
 		 393 aa  144  4e-33  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011313  VSAL_II0420  putative lipoprotein  27.48 
 
 		 308 aa  95.5  2e-18  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.37717  n/a   
 
 
-
 
NC_011992  Dtpsy_3452  hypothetical protein  25.75 
 
 		 407 aa  54.3  0.000004  Acidovorax ebreus TPSY  Bacteria  normal  0.149809  n/a   
 
 
-
 
NC_014212  Mesil_1037  hypothetical protein  28.4 
 
 		 409 aa  52.4  0.00001  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  0.0570191 
 
 
-
 
NC_012791  Vapar_2832  hypothetical protein  26.89 
 
 		 465 aa  47.4  0.0005  Variovorax paradoxus S110  Bacteria  normal  0.907997  n/a   
 
 
-
 
NC_007908  Rfer_1748  hypothetical protein  22.46 
 
 		 413 aa  43.9  0.006  Rhodoferax ferrireducens T118  Bacteria  hitchhiker  0.000762917  n/a   
 
 
-
 
NC_013501  Rmar_0721  hypothetical protein  24.44 
 
 		 741 aa  43.1  0.009  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>