Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0336 |
Symbol | |
ID | 5660736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 378856 |
End bp | 380070 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641234866 |
Product | hypothetical protein |
Protein accession | YP_001500199 |
Protein GI | 157960165 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0182266 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA TAGCTTTAGT TTCAACACTT GCTCTGATTT TAACTGCTTG TGGCGGTGGA AGCGACAGTT CTGACAATGG TAGTGGCGAT AACGGCAACG GCGGCGGAAG CATTCCTACT GTACCTACAG CTCCAACTGC AGTTAAAGGC ACTATTGATA AAGTCGATGC TGTACAGAAT AAAGTGGTTG TGAACGGCTA CAGCTATGAC GTTGCTGGCG TAATGTACGG CGAAGTAAAA CTAAATATTA ACGATCTGCA GCCAAACATG ATGGTGCAAA TCGGCGGCGC TCAAAAAGCA GCTGCAGTTC AAGTTCAACT TGAACCGACT ATCACAGGTA AAGTGACTGC AATCGATCCA GTTGCGGGTA CATTTGATGT TAACGGTATG ACCTTAACCT ACAAGTTATC TGACGAAATT GGGTTAGGTG ACTGGGTGAT GGTGTCTTCA CTACCGACTG CAGATGCAGG CTACAAAGTC TTGTCAGTGA TTAAGTTTGA TATTGAAACT GAATACCCAG GACTAGCAAA TAGCTACGAA GTTGAAGGTC GCCTATCTAG CTTAGATGAA AGTGCAAGAA GCTTTAAACT TGGCGCAGCC TTGACGGTTG ATTACTCAGG CACTGAAGCT CACAACATTG AAGGCGTGCT TGCTGATGGT CAGTGGGTTG AAGTTGAAGG TACGTTAGTG AATGACCTGT TTGTTGCGAC TAGCGTTGAA GTTGAAGATT ATAGCGATCT AGCTAACGAC ACCGAAGTTG AAGGTATTGT GACTTGGGTT GACGCGCAAA AAGCAGCATT CGAGCTTAAC TACCAAGGTC GCTTCGTTGT TAATGATCAA ACTAAGTTTG AAGATGGTCC AAAGTCAAAG CTGGTACAAG GTGCTTTAGT AGAAGTGACC TCTGTTAAGC AGGGCACGCA GCAAGTTGCG ACTGAAGTTG AGTTCGATGA CGACAACTCA ACAGGTGACG ACAACGATAA CGTGGGTAGC TGGAAAGAGT TTGAAGTGGA AGGCAATGTG ACAGCATCTG ATGCTACAGC TAAGAGCTTC GTTATTAAGG GCATTTCTAG TAGCATGACA GTTATTGTTG ACGCTAACAC TCAGTATGAA GACGGTATTC GTTTCGACAC CTTAAACCAG CAACGTATCG AAGTCGAAGG TGTGGTGATT AATGGTCAAA ACATCGCTCG TGAAATCGAA GCCGACAACG ATTAA
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Protein sequence | MKKIALVSTL ALILTACGGG SDSSDNGSGD NGNGGGSIPT VPTAPTAVKG TIDKVDAVQN KVVVNGYSYD VAGVMYGEVK LNINDLQPNM MVQIGGAQKA AAVQVQLEPT ITGKVTAIDP VAGTFDVNGM TLTYKLSDEI GLGDWVMVSS LPTADAGYKV LSVIKFDIET EYPGLANSYE VEGRLSSLDE SARSFKLGAA LTVDYSGTEA HNIEGVLADG QWVEVEGTLV NDLFVATSVE VEDYSDLAND TEVEGIVTWV DAQKAAFELN YQGRFVVNDQ TKFEDGPKSK LVQGALVEVT SVKQGTQQVA TEVEFDDDNS TGDDNDNVGS WKEFEVEGNV TASDATAKSF VIKGISSSMT VIVDANTQYE DGIRFDTLNQ QRIEVEGVVI NGQNIAREIE ADND
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