Gene Spea_0336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0336 
Symbol 
ID5660736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp378856 
End bp380070 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content45% 
IMG OID641234866 
Producthypothetical protein 
Protein accessionYP_001500199 
Protein GI157960165 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0182266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TAGCTTTAGT TTCAACACTT GCTCTGATTT TAACTGCTTG TGGCGGTGGA 
AGCGACAGTT CTGACAATGG TAGTGGCGAT AACGGCAACG GCGGCGGAAG CATTCCTACT
GTACCTACAG CTCCAACTGC AGTTAAAGGC ACTATTGATA AAGTCGATGC TGTACAGAAT
AAAGTGGTTG TGAACGGCTA CAGCTATGAC GTTGCTGGCG TAATGTACGG CGAAGTAAAA
CTAAATATTA ACGATCTGCA GCCAAACATG ATGGTGCAAA TCGGCGGCGC TCAAAAAGCA
GCTGCAGTTC AAGTTCAACT TGAACCGACT ATCACAGGTA AAGTGACTGC AATCGATCCA
GTTGCGGGTA CATTTGATGT TAACGGTATG ACCTTAACCT ACAAGTTATC TGACGAAATT
GGGTTAGGTG ACTGGGTGAT GGTGTCTTCA CTACCGACTG CAGATGCAGG CTACAAAGTC
TTGTCAGTGA TTAAGTTTGA TATTGAAACT GAATACCCAG GACTAGCAAA TAGCTACGAA
GTTGAAGGTC GCCTATCTAG CTTAGATGAA AGTGCAAGAA GCTTTAAACT TGGCGCAGCC
TTGACGGTTG ATTACTCAGG CACTGAAGCT CACAACATTG AAGGCGTGCT TGCTGATGGT
CAGTGGGTTG AAGTTGAAGG TACGTTAGTG AATGACCTGT TTGTTGCGAC TAGCGTTGAA
GTTGAAGATT ATAGCGATCT AGCTAACGAC ACCGAAGTTG AAGGTATTGT GACTTGGGTT
GACGCGCAAA AAGCAGCATT CGAGCTTAAC TACCAAGGTC GCTTCGTTGT TAATGATCAA
ACTAAGTTTG AAGATGGTCC AAAGTCAAAG CTGGTACAAG GTGCTTTAGT AGAAGTGACC
TCTGTTAAGC AGGGCACGCA GCAAGTTGCG ACTGAAGTTG AGTTCGATGA CGACAACTCA
ACAGGTGACG ACAACGATAA CGTGGGTAGC TGGAAAGAGT TTGAAGTGGA AGGCAATGTG
ACAGCATCTG ATGCTACAGC TAAGAGCTTC GTTATTAAGG GCATTTCTAG TAGCATGACA
GTTATTGTTG ACGCTAACAC TCAGTATGAA GACGGTATTC GTTTCGACAC CTTAAACCAG
CAACGTATCG AAGTCGAAGG TGTGGTGATT AATGGTCAAA ACATCGCTCG TGAAATCGAA
GCCGACAACG ATTAA
 
Protein sequence
MKKIALVSTL ALILTACGGG SDSSDNGSGD NGNGGGSIPT VPTAPTAVKG TIDKVDAVQN 
KVVVNGYSYD VAGVMYGEVK LNINDLQPNM MVQIGGAQKA AAVQVQLEPT ITGKVTAIDP
VAGTFDVNGM TLTYKLSDEI GLGDWVMVSS LPTADAGYKV LSVIKFDIET EYPGLANSYE
VEGRLSSLDE SARSFKLGAA LTVDYSGTEA HNIEGVLADG QWVEVEGTLV NDLFVATSVE
VEDYSDLAND TEVEGIVTWV DAQKAAFELN YQGRFVVNDQ TKFEDGPKSK LVQGALVEVT
SVKQGTQQVA TEVEFDDDNS TGDDNDNVGS WKEFEVEGNV TASDATAKSF VIKGISSSMT
VIVDANTQYE DGIRFDTLNQ QRIEVEGVVI NGQNIAREIE ADND