Gene Rfer_1748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1748 
Symbol 
ID3962449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1884119 
End bp1885360 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content55% 
IMG OID637916571 
Producthypothetical protein 
Protein accessionYP_523008 
Protein GI89900537 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000762917 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCATCAA ATCCTAGTTT TTATGCGCGT CAGGGCGGTC CGACTTTGCT GCGTCTGATC 
GTTGTGCCGC TGGCTGCTTG GCTATGCTTA TTTTTGCCCA TGCCAGTGCA GGCCCAAAAT
GTCTGCGCAA CCCAAGCCTC ACCGGTCAAT CCCGGATCAC GCAGTGGTGT GGCTGCGATC
ATGAAAGATC CCGGTGGAAT AGGTGGCACG GGCATGGTGG CAAGCAAGCC CTTGTTTGGG
GAAGGCGGCA TTGGCGGCAC CGGTATCGTT GGTGTGATCA CCGGTTTTGC CAGTATTTGC
GTCAATGGCA TTGAAGTGCA CTATGACGAG AAGACTCCAG TGCGGGACAA CGGTCAATCA
GGCTCTGCGA GTCAACTCGC GGTGGGGCAA GTGGTCGCCG TGACTGCCAC AGAAGATGGC
GCGCAAATAA CGGCCCGTGG CATTTCGATG ATTCATACCA TCGTAGGACC TGTCAGTGCA
TTGGATGTGG CAAAGGGCCA CTTGGAAGTT GTAGGCCAAG AAGTTTCGGC ACTGGAGTCA
GTTGATTTGA CCGTGCTGCA TACAGGTGAT TGGGTTCGCG TGGGCGGCTA CCGCACGGCC
AATGGCGCAG TCATGGCGTC GCGTGTCGAC CCATTCTCTG TGCAGGCGAC TGAGCAACTG
GCTCAAGTTC GTGGTCCCGT CAGTGTGCTT CAAGGCAATA CCGTCATGGT GGGTGATACG
CAGATCGATT TGGCATCGTT GGCGCTACCT CATGGCTTGG CCGTAGGGCA GGAGTTGTGG
GTCAGTGGGA TGTGGAACGA TGGTGTGTTG CATGCCCGAC AAATCGCTGT CAATCCCACG
ATGGAGGGTT TGGGTCACGT TAATAAAGTG GTGCTCGAAG GTTATATCCA TCAATTGAGC
GAGAACGAAA TTAGCTTGGG TTTTCAGTCT CTAAAACTCG CGCAAGGTGT GCATATGGTG
GGTGGTACGA AGGCTGAACT CGCAGTGAAC CGTCGCGTGC AAATCAGCGG TCGGGTTGAA
ACGGATCAAC GTATCACTGT CGATCGGATT GAGTTCAAGG GTTCGACATC AAAAAGTAGC
ATGGCTGGCT CCGCAGTCAT GAACAGTGCA GGGGGCACAG GCGGTACGGG TAGCTCAGGA
AGTATGGGCG GTTCAGGCGG CATGGGGGGC TCAAGTGGTT CAGGCAGTTC AGGTGGTATG
GGTGGGTCCG GCGGCATGGG AAAATCTGGC GGCATGAAGT AA
 
Protein sequence
MPSNPSFYAR QGGPTLLRLI VVPLAAWLCL FLPMPVQAQN VCATQASPVN PGSRSGVAAI 
MKDPGGIGGT GMVASKPLFG EGGIGGTGIV GVITGFASIC VNGIEVHYDE KTPVRDNGQS
GSASQLAVGQ VVAVTATEDG AQITARGISM IHTIVGPVSA LDVAKGHLEV VGQEVSALES
VDLTVLHTGD WVRVGGYRTA NGAVMASRVD PFSVQATEQL AQVRGPVSVL QGNTVMVGDT
QIDLASLALP HGLAVGQELW VSGMWNDGVL HARQIAVNPT MEGLGHVNKV VLEGYIHQLS
ENEISLGFQS LKLAQGVHMV GGTKAELAVN RRVQISGRVE TDQRITVDRI EFKGSTSKSS
MAGSAVMNSA GGTGGTGSSG SMGGSGGMGG SSGSGSSGGM GGSGGMGKSG GMK