Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1748 |
Symbol | |
ID | 3962449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 1884119 |
End bp | 1885360 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637916571 |
Product | hypothetical protein |
Protein accession | YP_523008 |
Protein GI | 89900537 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000762917 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCATCAA ATCCTAGTTT TTATGCGCGT CAGGGCGGTC CGACTTTGCT GCGTCTGATC GTTGTGCCGC TGGCTGCTTG GCTATGCTTA TTTTTGCCCA TGCCAGTGCA GGCCCAAAAT GTCTGCGCAA CCCAAGCCTC ACCGGTCAAT CCCGGATCAC GCAGTGGTGT GGCTGCGATC ATGAAAGATC CCGGTGGAAT AGGTGGCACG GGCATGGTGG CAAGCAAGCC CTTGTTTGGG GAAGGCGGCA TTGGCGGCAC CGGTATCGTT GGTGTGATCA CCGGTTTTGC CAGTATTTGC GTCAATGGCA TTGAAGTGCA CTATGACGAG AAGACTCCAG TGCGGGACAA CGGTCAATCA GGCTCTGCGA GTCAACTCGC GGTGGGGCAA GTGGTCGCCG TGACTGCCAC AGAAGATGGC GCGCAAATAA CGGCCCGTGG CATTTCGATG ATTCATACCA TCGTAGGACC TGTCAGTGCA TTGGATGTGG CAAAGGGCCA CTTGGAAGTT GTAGGCCAAG AAGTTTCGGC ACTGGAGTCA GTTGATTTGA CCGTGCTGCA TACAGGTGAT TGGGTTCGCG TGGGCGGCTA CCGCACGGCC AATGGCGCAG TCATGGCGTC GCGTGTCGAC CCATTCTCTG TGCAGGCGAC TGAGCAACTG GCTCAAGTTC GTGGTCCCGT CAGTGTGCTT CAAGGCAATA CCGTCATGGT GGGTGATACG CAGATCGATT TGGCATCGTT GGCGCTACCT CATGGCTTGG CCGTAGGGCA GGAGTTGTGG GTCAGTGGGA TGTGGAACGA TGGTGTGTTG CATGCCCGAC AAATCGCTGT CAATCCCACG ATGGAGGGTT TGGGTCACGT TAATAAAGTG GTGCTCGAAG GTTATATCCA TCAATTGAGC GAGAACGAAA TTAGCTTGGG TTTTCAGTCT CTAAAACTCG CGCAAGGTGT GCATATGGTG GGTGGTACGA AGGCTGAACT CGCAGTGAAC CGTCGCGTGC AAATCAGCGG TCGGGTTGAA ACGGATCAAC GTATCACTGT CGATCGGATT GAGTTCAAGG GTTCGACATC AAAAAGTAGC ATGGCTGGCT CCGCAGTCAT GAACAGTGCA GGGGGCACAG GCGGTACGGG TAGCTCAGGA AGTATGGGCG GTTCAGGCGG CATGGGGGGC TCAAGTGGTT CAGGCAGTTC AGGTGGTATG GGTGGGTCCG GCGGCATGGG AAAATCTGGC GGCATGAAGT AA
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Protein sequence | MPSNPSFYAR QGGPTLLRLI VVPLAAWLCL FLPMPVQAQN VCATQASPVN PGSRSGVAAI MKDPGGIGGT GMVASKPLFG EGGIGGTGIV GVITGFASIC VNGIEVHYDE KTPVRDNGQS GSASQLAVGQ VVAVTATEDG AQITARGISM IHTIVGPVSA LDVAKGHLEV VGQEVSALES VDLTVLHTGD WVRVGGYRTA NGAVMASRVD PFSVQATEQL AQVRGPVSVL QGNTVMVGDT QIDLASLALP HGLAVGQELW VSGMWNDGVL HARQIAVNPT MEGLGHVNKV VLEGYIHQLS ENEISLGFQS LKLAQGVHMV GGTKAELAVN RRVQISGRVE TDQRITVDRI EFKGSTSKSS MAGSAVMNSA GGTGGTGSSG SMGGSGGMGG SSGSGSSGGM GGSGGMGKSG GMK
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