10 homologs were found in PanDaTox collection
for query gene Rxyl_2992 on replicon NC_008148
Organism: Rubrobacter xylanophilus DSM 9941



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008148  Rxyl_2992  hypothetical protein  100 
 
 
487 aa  963    Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.24732  n/a   
 
 
-
 
NC_013757  Gobs_2437  hypothetical protein  45.24 
 
 
481 aa  394  1e-108  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4123  hypothetical protein  27.86 
 
 
532 aa  160  5e-38  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.433169  normal 
 
 
-
 
NC_008148  Rxyl_0924  hypothetical protein  29.86 
 
 
491 aa  155  2e-36  Rubrobacter xylanophilus DSM 9941  Bacteria  hitchhiker  0.00779194  n/a   
 
 
-
 
NC_014148  Plim_0143  hypothetical protein  29.66 
 
 
611 aa  118  1.9999999999999998e-25  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.188427  n/a   
 
 
-
 
NC_009073  Pcal_1222  hypothetical protein  26.92 
 
 
484 aa  110  7.000000000000001e-23  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal  0.256376 
 
 
-
 
NC_010571  Oter_3546  manganese transporter NRAMP  23.3 
 
 
453 aa  68.9  0.0000000002  Opitutus terrae PB90-1  Bacteria  normal  0.0787063  normal 
 
 
-
 
NC_008148  Rxyl_2881  manganese transporter NRAMP  24.58 
 
 
468 aa  64.7  0.000000004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0516057  n/a   
 
 
-
 
NC_014148  Plim_3404  hypothetical protein  21.92 
 
 
508 aa  51.6  0.00003  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2464  Mn2+/Fe2+ transporter, NRAMP family  22.32 
 
 
434 aa  43.9  0.007  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0413329  n/a   
 
 
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