Gene Plim_3404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3404 
Symbol 
ID9140120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4407834 
End bp4409360 
Gene Length1527 bp 
Protein Length508 aa 
Translation table11 
GC content56% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003631416 
Protein GI296123638 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGCCG GGATTTCCTG TGGACTTCTC GAAGAAAACG AACTCTTTGA TGTTCAGCGA 
GTGGCTATGT CTGAAGAACT TGCGGCTTAC GATCCTTATG CACTCCCGCC GGAAGATGTG
CAGGAACCGC CCAGGTCACT CGGGGCGGCA CTCCTTAAGA TTGGCCCGGG AATCATTCTC
GCTGGAACAA TCGTCGGCTC TGGCGAGTTG ATTCTCACCA CATCTCTCGG CGCAAAAAAC
GGCTTTGTCT TCTTGTGGTT GATCCTCTTC AGCTGTGTGA TCAAGGTCTT TGTGCAGGTT
GAATTAGGCC GATATGCCAT CTCATCGGGA AAGCCCACAC TGGGGGCGCT CAACGAATTG
CCGGGGCGCA TCTTTCCGAC GCATTGGCTG GTCTGGTGGT GGTTCGGGAT GATGCTCTGC
ACGGTCATGC AGTTAGGAGG CATGACGGGC GGTGTGGGGC AGGTTTTACA GCTGGCATTC
CCGGGATTTT CCGAACAGAT GACAGCGGGT ATTGTGCATC TCGTTCCTGC GGCAAAAGGG
TTGTTTGCTG CTCGTCCAGA AATGATCTGG GCGATTGTCA CCTGCCTGGC AGCCATGCTG
CTGATTTATC AGGGCGGTTA TCGGCGGATT GAATGGCTCA CCACGATCAT TGTGGTGAGT
GTGACGACAA TCACCATGCT GGCTGTCGCA GCTCTGGCGT GGACAGACTA CTCGATCTCC
TGGAATCAAC TGGCGAGCGG CTTTCGATTT CAAACGCCCC CGGCAGGCAT GATGACTGCT
TTTGCGGTCT TTGGCATTAC CGGCGTGGGT GCAACGGAGC TGTTTTATTA TCCCTACTGG
TGCCTGGAGA AAGGCTATGC CCGCTTTGTG GGCCGGTGTG ATGGCTCGCC GGAATGGGAG
GCCCGGGCGA AAGGCTGGAT CAAAGTCATG CAGCTCGATG CGTGGGTCAG TATGGTGGTC
TTCACCATTT CGACTGTGGC GTTTTATCTG CTGGGAGCTG CTGTGCTGCA TCCACAGGGC
CTGCATCCCG AAGGGAGCCA GCTCATCAAT ACGCTGGCCG ATATGTATGC CGGGCCCTTC
GGCCAGTGGA CGCGGATTCT GTTTCTCGTG GGAGCAGGGG CCGTCCTCTT CAAAACGCTT
TACCTGGCCT GCGCAGCCAA TAGTCGGCTG GCGGCTGATT TTGTGATTCT GGCAGGTGCA
GCTCCTGCCG GAGTCGCACA AGTGCGGCTC AAGATCATTC AGCGGTTCTG TCTCTTCTTT
CCTGTGCTGG CGCTGGTCTT CTACTTCATG CTGCATGATC CGAAGCTGCT GGTGCAACTG
GGCGGGATTG CTCAGGCGAT TACACTGCCG ATGATTGCTG CCGCGACGAT TTACTTCCGC
TACCAGAAAA TCCACCCCGC ACTTCAGCCC AGCCGGTTCA CCGATGGACT GCTCTGGGTG
GCGACGATCG CCATCTTTTT CGTGGCCTCG ATGATGATTC CTCAGCAATT CCGTGAGCTC
TCGAGGCTCG TCGCCAACCT GTTCTGA
 
Protein sequence
MLAGISCGLL EENELFDVQR VAMSEELAAY DPYALPPEDV QEPPRSLGAA LLKIGPGIIL 
AGTIVGSGEL ILTTSLGAKN GFVFLWLILF SCVIKVFVQV ELGRYAISSG KPTLGALNEL
PGRIFPTHWL VWWWFGMMLC TVMQLGGMTG GVGQVLQLAF PGFSEQMTAG IVHLVPAAKG
LFAARPEMIW AIVTCLAAML LIYQGGYRRI EWLTTIIVVS VTTITMLAVA ALAWTDYSIS
WNQLASGFRF QTPPAGMMTA FAVFGITGVG ATELFYYPYW CLEKGYARFV GRCDGSPEWE
ARAKGWIKVM QLDAWVSMVV FTISTVAFYL LGAAVLHPQG LHPEGSQLIN TLADMYAGPF
GQWTRILFLV GAGAVLFKTL YLACAANSRL AADFVILAGA APAGVAQVRL KIIQRFCLFF
PVLALVFYFM LHDPKLLVQL GGIAQAITLP MIAAATIYFR YQKIHPALQP SRFTDGLLWV
ATIAIFFVAS MMIPQQFREL SRLVANLF