Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3546 |
Symbol | |
ID | 6205263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 4618122 |
End bp | 4619483 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641693214 |
Product | manganese transporter NRAMP |
Protein accession | YP_001820423 |
Protein GI | 182415357 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0787063 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCGG CAAACCCTGC GCCTGCCGCC GCGAAGCTTC TTTCGACGAT CGAGCCAGCG CCGACAACGC TGCGCGGGCT TACGCGGCAA CTCGGGCCGG GGTTGATTTT GTCGGCGATC ATCGTCGGCG CGGGCGAGTT GATCGTGACG CCGAAGCTCG GCGCGGAGGT GGGGTTTCGG TTGTTGTGGT TCATCATCCT TGGCTGCCTG GTGAAGGTCT TCGTGCAGAT CGAACTCGGC CGGTATGCCG TGACGCGGGG CCGCACGACG CTGGAGGCGT TGAACACACT GCCGGGGCCG CGGCTGATCG TCTCCTGGGT GATGTGGATC TGGCTGGCGA TGTATCTCTG TCTCGTGCCG CAGGTCGCCG GGATCGTCGG CGGCGTGGCG ACGGCACTGA AGCTGGGCGG CGCGGCGATT CCGGTCGGTT GGCTGGCCGT GCTGGTTGGC GCGAGCACGG CGGCGCTACT CGTGGTGGGA AGGTATCGAT TGGTGGAGTC GTTCTCCACG GTGCTGGTAG GCGCGTTCAC GGTGACGACG CTGGTCGCGG TCGTGGCGCT GCAGTTCACT CCCTATGCGG TGACCGGCGA GCAGCTGGCG AGCGGGCTGT CGTTTCACCT GCCGGCGAAT CTCGCGACGG CGTTTGGCGC GTTCGGGCTG ATCGGGGTCG GCGCGTCGGA GTTGATCTAC TACCCCTACT GGTGTTTGGA AAAAGGTTAC GCGCGAAAAA TCGGGCCGGA CGACGGCACG CCCGAGTGGC GCGCGCGGGC GGCGGCGTGG CTGCGAGTAA TGCGCGTCGA CGCGTGGCTG TGCTTCACCG TCTATACGAT CACGACGATT GCCTTCTACC TGCTGGGCGC GGCGATCCTC CACGCGAAGC AGCTGCAGGT CGAAGACAGC AAGATGATCG AGACGCTGTC GTTCATGTAT CTCGACGCTT TCGGCGGCTG GAGCCTGTGG GTGTTCGCGA TCGGCGCGAT CGCCGTGCTC TATTCGACGG TGTTTGGCGG GACGGCGTCG AACGCGCGGT TGCTCGCGGA TTCGCTCGCC GTGTTCCGAC TCAAGACCTA TCGCGACGCC GAGCACCGGG TGCGCTGGGT GAAGATCTCG GCGGTGATCC TGGCGGTGGC GTTCACCTCG ATTTTCCTGC TCGTCGGCAA CCCGGTGTCG CTGGTTTTCC TCGGCGCCGT AGCCCAGGGC ATGATGCTGC CATTCCTCGC GGGCGCGGCG CTGTATTTCC ATTTCACGAG TCCGCATCGC GAGCTGCGCG CACGACCGTT CTCGTTGGCC GGCCTGATCG TCGCGGCCGT GGCGATGACC GCACTCGGCG GATACCAAGT GATCGCGGCG CTGACGCGCT AG
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Protein sequence | MTPANPAPAA AKLLSTIEPA PTTLRGLTRQ LGPGLILSAI IVGAGELIVT PKLGAEVGFR LLWFIILGCL VKVFVQIELG RYAVTRGRTT LEALNTLPGP RLIVSWVMWI WLAMYLCLVP QVAGIVGGVA TALKLGGAAI PVGWLAVLVG ASTAALLVVG RYRLVESFST VLVGAFTVTT LVAVVALQFT PYAVTGEQLA SGLSFHLPAN LATAFGAFGL IGVGASELIY YPYWCLEKGY ARKIGPDDGT PEWRARAAAW LRVMRVDAWL CFTVYTITTI AFYLLGAAIL HAKQLQVEDS KMIETLSFMY LDAFGGWSLW VFAIGAIAVL YSTVFGGTAS NARLLADSLA VFRLKTYRDA EHRVRWVKIS AVILAVAFTS IFLLVGNPVS LVFLGAVAQG MMLPFLAGAA LYFHFTSPHR ELRARPFSLA GLIVAAVAMT ALGGYQVIAA LTR
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